Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30098
         (423 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    50   3e-05
UniRef50_Q9TVQ2 Cluster: Putative uncharacterized protein; n=2; ...    33   1.8  
UniRef50_Q01E31 Cluster: Dual specificity phosphatase Cdc25; n=3...    33   2.4  
UniRef50_Q1MH96 Cluster: Putative cell division protein precurso...    33   3.2  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   4.2  
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    32   5.6  
UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-P...    32   5.6  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    32   5.6  
UniRef50_Q61F76 Cluster: Putative uncharacterized protein CBG117...    31   7.4  
UniRef50_A3BZ88 Cluster: Putative uncharacterized protein; n=2; ...    31   9.7  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 49.6 bits (113), Expect = 3e-05
 Identities = 23/45 (51%), Positives = 27/45 (60%)
 Frame = +2

Query: 119 IYGTGGLLTPLVAPMLXXXXXXXXXXXXXXXXXXYYGNLVAGSIV 253
           IYGTGGLLTP+VAPML                  YYGN+VAGS++
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVI 61


>UniRef50_Q9TVQ2 Cluster: Putative uncharacterized protein; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein -
            Caenorhabditis elegans
          Length = 1651

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +1

Query: 67   EHGASSCISGKRGRRC---CNIWHWGSVDSISGSHARFQLSGNSGRKHSRCCTSILRKFS 237
            EH   SC+SG  G +C   C   +    D ISG H   Q  G  G+K +R C   L+ + 
Sbjct: 1195 EHCEKSCVSGHYGAKCEETCECENGALCDPISG-HCSCQ-PGWRGKKCNRPC---LKGYF 1249

Query: 238  GRQHCVQ 258
            GR HC Q
Sbjct: 1250 GR-HCSQ 1255


>UniRef50_Q01E31 Cluster: Dual specificity phosphatase Cdc25; n=3;
           Ostreococcus|Rep: Dual specificity phosphatase Cdc25 -
           Ostreococcus tauri
          Length = 517

 Score = 33.1 bits (72), Expect = 2.4
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 350 TEKVRSWSDVENG*CLASPHGVGATMAAAVNCTQCCRPL 234
           T   R+ SD  NG C+    G  A MAAA      CRPL
Sbjct: 216 TPFARALSDASNGRCVDGGQGGAAAMAAAAASAMPCRPL 254


>UniRef50_Q1MH96 Cluster: Putative cell division protein precursor;
           n=1; Rhizobium leguminosarum bv. viciae 3841|Rep:
           Putative cell division protein precursor - Rhizobium
           leguminosarum bv. viciae (strain 3841)
          Length = 637

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 335 SWSDVENG*CLASPHGVGATMAAAVNCTQCCRPLNFRSMLVQQ 207
           +W+DV+ G  L+ P G G T  A    T C  PL   S  V Q
Sbjct: 225 TWADVDRGIILSGPPGTGKTTYARALATTCGIPLVLGSAAVWQ 267


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 4.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 34  LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 153
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 55  QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSHAR 168
           Q L+EHG    S ++G+R  RC N WH G  D +     R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 2139

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1

Query: 175 LSGNSGRKHSRCCTSILRKFSGRQHCVQLTAAA 273
           LSG+S   HSR  T++LRK S +QH   L A +
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQHTNSLRAVS 220


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 82   SCISGKRGRRC--CNIWHWGSVDSISGSHARFQLSGN 186
            +C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_Q61F76 Cluster: Putative uncharacterized protein CBG11746;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG11746 - Caenorhabditis
           briggsae
          Length = 985

 Score = 31.5 bits (68), Expect = 7.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 305 LASPHGVGATMAAAVNCTQCCRPLNFRSMLVQQRL 201
           LA+     A  AAA N  Q   P NF ++L QQRL
Sbjct: 884 LAAAQAAAAAQAAAANRQQQATPQNFEALLQQQRL 918


>UniRef50_A3BZ88 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 285

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 194 LPLFPLS*NRAWEPL---MESTDPQCHILQHRRPRLPL 90
           LP  P      W PL   M  T P C +L++ RPRLPL
Sbjct: 139 LPFAPSLVRGRWVPLVGEMARTGPLCLLLENPRPRLPL 176


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,678,273
Number of Sequences: 1657284
Number of extensions: 7327218
Number of successful extensions: 16126
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16121
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)