Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30097
         (409 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071292-1|AAL48914.1|  513|Drosophila melanogaster RE32485p pro...    28   5.4  
AE014296-3379|AAN12133.1|  513|Drosophila melanogaster CG5130-PB...    28   5.4  
AE014296-3378|AAF51612.1|  513|Drosophila melanogaster CG5130-PA...    28   5.4  
AY118402-1|AAM48431.1|  606|Drosophila melanogaster RE60936p pro...    27   9.5  
AF288482-1|AAG01528.1|  606|Drosophila melanogaster atypical pro...    27   9.5  
AE013599-1990|ABI31094.1|  608|Drosophila melanogaster CG10261-P...    27   9.5  
AE013599-1989|ABI31090.1|  606|Drosophila melanogaster CG10261-P...    27   9.5  
AE013599-1988|AAF58177.2|  606|Drosophila melanogaster CG10261-P...    27   9.5  

>AY071292-1|AAL48914.1|  513|Drosophila melanogaster RE32485p
           protein.
          Length = 513

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 1   AGCRSDSPVKCLNSSSRLATYKSTACLE 84
           +G +S SPVKC  +S   +  KS +C E
Sbjct: 428 SGRKSSSPVKCAGNSHEHSRAKSKSCAE 455


>AE014296-3379|AAN12133.1|  513|Drosophila melanogaster CG5130-PB,
           isoform B protein.
          Length = 513

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 1   AGCRSDSPVKCLNSSSRLATYKSTACLE 84
           +G +S SPVKC  +S   +  KS +C E
Sbjct: 428 SGRKSSSPVKCAGNSHEHSRAKSKSCAE 455


>AE014296-3378|AAF51612.1|  513|Drosophila melanogaster CG5130-PA,
           isoform A protein.
          Length = 513

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 1   AGCRSDSPVKCLNSSSRLATYKSTACLE 84
           +G +S SPVKC  +S   +  KS +C E
Sbjct: 428 SGRKSSSPVKCAGNSHEHSRAKSKSCAE 455


>AY118402-1|AAM48431.1|  606|Drosophila melanogaster RE60936p
           protein.
          Length = 606

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = -3

Query: 215 NENISYPNVFYPFRNHINY---RPF*IKW 138
           N+NISY  + Y  RN   +   +PF IKW
Sbjct: 47  NKNISYEELCYEIRNICRFPLDQPFTIKW 75


>AF288482-1|AAG01528.1|  606|Drosophila melanogaster atypical
           protein kinase C protein.
          Length = 606

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = -3

Query: 215 NENISYPNVFYPFRNHINY---RPF*IKW 138
           N+NISY  + Y  RN   +   +PF IKW
Sbjct: 47  NKNISYEELCYEIRNICRFPLDQPFTIKW 75


>AE013599-1990|ABI31094.1|  608|Drosophila melanogaster CG10261-PD,
           isoform D protein.
          Length = 608

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = -3

Query: 215 NENISYPNVFYPFRNHINY---RPF*IKW 138
           N+NISY  + Y  RN   +   +PF IKW
Sbjct: 47  NKNISYEELCYEIRNICRFPLDQPFTIKW 75


>AE013599-1989|ABI31090.1|  606|Drosophila melanogaster CG10261-PC,
           isoform C protein.
          Length = 606

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = -3

Query: 215 NENISYPNVFYPFRNHINY---RPF*IKW 138
           N+NISY  + Y  RN   +   +PF IKW
Sbjct: 47  NKNISYEELCYEIRNICRFPLDQPFTIKW 75


>AE013599-1988|AAF58177.2|  606|Drosophila melanogaster CG10261-PA,
           isoform A protein.
          Length = 606

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = -3

Query: 215 NENISYPNVFYPFRNHINY---RPF*IKW 138
           N+NISY  + Y  RN   +   +PF IKW
Sbjct: 47  NKNISYEELCYEIRNICRFPLDQPFTIKW 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,453,394
Number of Sequences: 53049
Number of extensions: 350681
Number of successful extensions: 949
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)