Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30096
         (537 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0186 + 1454533-1454710,1455299-1455420,1455508-1455806,145...    29   3.1  
04_04_1613 - 34779640-34779747,34780086-34780151,34781155-347812...    27   9.5  

>06_01_0186 +
           1454533-1454710,1455299-1455420,1455508-1455806,
           1455846-1455933,1456015-1456096,1457130-1457242
          Length = 293

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 48  ALWRPLAPADFTEHHMPHLLHHTRQPQSSRATPP 149
           A WR  A AD   HH  H L  +  P +    PP
Sbjct: 4   AYWRYAAAADAARHHHHHQLPLSAAPAAGMPAPP 37


>04_04_1613 -
           34779640-34779747,34780086-34780151,34781155-34781214,
           34781690-34781795,34781965-34782110,34782934-34783016,
           34783157-34783194,34783441-34783472,34783732-34783828,
           34783951-34784234,34784752-34784904
          Length = 390

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 528 QQGLRVRISCEWCSMRSVSCNRC 460
           +  +  +ISC +C  R V+CN C
Sbjct: 229 EDDIEEKISCAFCPSRVVACNPC 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,600,880
Number of Sequences: 37544
Number of extensions: 105544
Number of successful extensions: 340
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)