Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30096
         (537 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126441-1|AAI26442.1|  387|Homo sapiens BarH-like homeobox 2 pr...    32   1.5  
BC126439-1|AAI26440.1|  387|Homo sapiens BarH-like homeobox 2 pr...    32   1.5  
AY338397-1|AAQ01189.1|  387|Homo sapiens BARH-like 2 protein pro...    32   1.5  

>BC126441-1|AAI26442.1|  387|Homo sapiens BarH-like homeobox 2
           protein.
          Length = 387

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 60  PLAPADFTEHHMPHLLHHTRQPQSSRATPPQ 152
           P   AD T+HH  H LHH++QP    A P Q
Sbjct: 75  PHLVADATQHH--HHLHHSQQPPPPAAAPTQ 103


>BC126439-1|AAI26440.1|  387|Homo sapiens BarH-like homeobox 2
           protein.
          Length = 387

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 60  PLAPADFTEHHMPHLLHHTRQPQSSRATPPQ 152
           P   AD T+HH  H LHH++QP    A P Q
Sbjct: 75  PHLVADATQHH--HHLHHSQQPPPPAAAPTQ 103


>AY338397-1|AAQ01189.1|  387|Homo sapiens BARH-like 2 protein
           protein.
          Length = 387

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 60  PLAPADFTEHHMPHLLHHTRQPQSSRATPPQ 152
           P   AD T+HH  H LHH++QP    A P Q
Sbjct: 75  PHLVADATQHH--HHLHHSQQPPPPAAAPTQ 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,184,621
Number of Sequences: 237096
Number of extensions: 555956
Number of successful extensions: 1693
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)