Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30095
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal pro... 140 6e-34
AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical... 31 0.57
AL023816-4|CAA19433.2| 344|Caenorhabditis elegans Hypothetical ... 29 1.7
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr... 29 2.3
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein. 29 2.3
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ... 29 2.3
U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF067940-8|AAC19200.1| 518|Caenorhabditis elegans Hypothetical ... 29 3.1
Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF077541-6|AAC64630.1| 307|Caenorhabditis elegans Hypothetical ... 28 5.3
Z77670-2|CAB01250.1| 588|Caenorhabditis elegans Hypothetical pr... 27 7.0
AJ512335-1|CAD54509.1| 588|Caenorhabditis elegans trehalase pro... 27 7.0
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 27 7.0
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7 protein.
Length = 244
Score = 140 bits (339), Expect = 6e-34
Identities = 64/101 (63%), Positives = 76/101 (75%)
Frame = +2
Query: 206 GIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKFK 385
G P K + + AK+ G R+PIT N+IVE+ L K NIIC+EDL HEI TVG FK
Sbjct: 139 GYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFK 198
Query: 386 YASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDL 508
A+NFLWPFKLNNPTGGW KKT H+V+GGDFGNRED+IN+L
Sbjct: 199 EATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNL 239
Score = 90.2 bits (214), Expect = 9e-19
Identities = 38/53 (71%), Positives = 47/53 (88%)
Frame = +3
Query: 96 RKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRG 254
RK LQ+ RLRQINNGVFV+LNKAT+ +LRI EPY+AWGYPN K++ +L+YKRG
Sbjct: 102 RKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRG 154
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +1
Query: 1 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVK 102
+A +G++YVP E K+AFV+RIRGINQ+ PK K
Sbjct: 70 EAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRK 103
>AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical
protein Y47D3A.30 protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 212 VSPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFGE 84
++PS RL H H+ L Q +++ I Q K++Q F GE
Sbjct: 496 LAPSGTRLSTVRHTHTLLFQIWQYKINSFCQIKKIQFFVVCGE 538
>AL023816-4|CAA19433.2| 344|Caenorhabditis elegans Hypothetical
protein T05G11.6 protein.
Length = 344
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 327 LCLWSLFSTMLLEVIGIRCPLSLAIHVCILT-HGHSLSWGIPKQCKARRYVAYSQ*PYSD 151
L +W + + +L +I I+CPLS + I T HG L + I C AY + Y++
Sbjct: 114 LVVWIVVAMSILRLIAIKCPLSPRVQKTIETKHGIRLIYFI---CITLIPFAYLEIQYNN 170
Query: 150 VQTHHCL 130
V+ L
Sbjct: 171 VRVFQTL 177
>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical protein
C05C12.3 protein.
Length = 1694
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 24 LRSRGSQIGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN 158
L R Q+ PW P FT + V+ LF+L + ++ +F R N
Sbjct: 1346 LFERYGQVMEYESTPWLPPPFTIIYHVIWLFKLIKSSSRMFERKN 1390
>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
Length = 1694
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 24 LRSRGSQIGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN 158
L R Q+ PW P FT + V+ LF+L + ++ +F R N
Sbjct: 1346 LFERYGQVMEYESTPWLPPPFTIIYHVIWLFKLIKSSSRMFERKN 1390
>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1681
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 24 LRSRGSQIGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN 158
L R Q+ PW P FT + V+ LF+L + ++ +F R N
Sbjct: 1333 LFERYGQVMEYESTPWLPPPFTIIYHVIWLFKLIKSSSRMFERKN 1377
>U23453-3|AAC46757.6| 297|Caenorhabditis elegans Hypothetical
protein B0252.3a protein.
Length = 297
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 173 YATYRRALHCLGIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLH---KHNIICVE 343
Y T +LH L Q E I+ W+ K+ G + I+++ IVE R +C E
Sbjct: 38 YMTVPESLHFLVSSQQNE----KIEAWLEKIRGPKGDISASDIVEDRDENGSSFKTLCRE 93
Query: 344 DLIHEIFTV 370
H++F V
Sbjct: 94 MWKHKMFIV 102
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 173 YATYRRALHCLGIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLH---KHNIICVE 343
Y T +LH L Q E I+ W+ K+ G + I+++ IVE R +C E
Sbjct: 205 YMTVPESLHFLVSSQQNE----KIEAWLEKIRGPKGDISASDIVEDRDENGSSFKTLCRE 260
Query: 344 DLIHEIFTV 370
H++F V
Sbjct: 261 MWKHKMFIV 269
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 173 YATYRRALHCLGIPQLKECP*VSIQTWIAKLSGQRIPITSNSIVEKRLH---KHNIICVE 343
Y T +LH L Q E I+ W+ K+ G + I+++ IVE R +C E
Sbjct: 225 YMTVPESLHFLVSSQQNE----KIEAWLEKIRGPKGDISASDIVEDRDENGSSFKTLCRE 280
Query: 344 DLIHEIFTV 370
H++F V
Sbjct: 281 MWKHKMFIV 289
>AF067940-8|AAC19200.1| 518|Caenorhabditis elegans Hypothetical
protein F36F12.1 protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 15 WQLLRSRGSQIGICHPNPWYQPSFTEV-RKVLQLFRLRQINN 137
+Q++R G Q+GI PW P F++V R L+ R ++ N
Sbjct: 210 YQMVRELG-QLGIVTTQPWLTPKFSQVARPFLEPSRNSELRN 250
>Z73976-4|CAA98287.2| 965|Caenorhabditis elegans Hypothetical
protein T07C12.8 protein.
Length = 965
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -2
Query: 513 PERSLILSSRLPKSPPST**MVFLRQPPVGLFNLKGHRKLLAYLNFSPTVKISWMR-SST 337
P+ + + P SP + +VFL + + HR +Y +F PT S++R +S
Sbjct: 89 PKHCISVKLSYPLSPTNILSIVFLSPYSLNYLSFSAHRSTFSYCSF-PTGHRSFVRPASA 147
Query: 336 QIMLCLWSLFSTMLLEVIGIRCPLSLAIHV 247
I+L L S LL +C + + + V
Sbjct: 148 NILLPL----SYQLLGYGSFKCEMDIIVIV 173
>AF077541-6|AAC64630.1| 307|Caenorhabditis elegans Hypothetical
protein Y23H5A.3 protein.
Length = 307
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 75 QPSFTEVRKVLQLFRLRQINNGVFV-RLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKR 251
Q + + Q+++ Q NG + R +K V+ L ++ P + +P+LK ++LV +
Sbjct: 237 QSAVVALENKFQVYQAVQDFNGKKLDRNHKLQVSSLVVSSPAVPLEWPSLKKSKKLVEQV 296
Query: 252 GSP 260
G P
Sbjct: 297 GKP 299
>Z77670-2|CAB01250.1| 588|Caenorhabditis elegans Hypothetical
protein W05E10.4 protein.
Length = 588
Score = 27.5 bits (58), Expect = 7.0
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = -1
Query: 481 TKVSPVDIMNGLLAPTTSWIVQFEGPQEITRVLELFSNSE-DLMDEVLNTDNVVFMEPLL 305
TKV PVD+ NGLL + T+ ++F N D D V N VF
Sbjct: 328 TKVLPVDL-NGLLCWNMDIMEYLYEQIGDTKNSQIFRNKRADFRDTVQN----VFY---- 378
Query: 304 NNAVGSDWY--TLSTQLGDPRLYTNS 233
N WY L TQ +PR YT++
Sbjct: 379 -NRTDGTWYDYNLRTQSHNPRFYTST 403
>AJ512335-1|CAD54509.1| 588|Caenorhabditis elegans trehalase
protein.
Length = 588
Score = 27.5 bits (58), Expect = 7.0
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = -1
Query: 481 TKVSPVDIMNGLLAPTTSWIVQFEGPQEITRVLELFSNSE-DLMDEVLNTDNVVFMEPLL 305
TKV PVD+ NGLL + T+ ++F N D D V N VF
Sbjct: 328 TKVLPVDL-NGLLCWNMDIMEYLYEQIGDTKNSQIFRNKRADFRDTVQN----VFY---- 378
Query: 304 NNAVGSDWY--TLSTQLGDPRLYTNS 233
N WY L TQ +PR YT++
Sbjct: 379 -NRTDGTWYDYNLRTQSHNPRFYTST 403
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 535 IYLFKPSS*KIVDLVFAVTKVSPVDIMNGLLAPTTSWIVQFE 410
+ L +PSS K F+VT+V PVD+ WI+Q +
Sbjct: 563 VNLCRPSSRKYTGDAFSVTRVQPVDMFP--QTNHMEWIIQLD 602
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 373 SNSEDLMDEVLNTDNVVFMEPLLNNAVGSDWYTLSTQLGD 254
SNS D + T + +PLLNN V S T ST D
Sbjct: 142 SNSPDSSTTAVTTSQITAFQPLLNNFVSST--TASTSRPD 179
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 373 SNSEDLMDEVLNTDNVVFMEPLLNNAVGSDWYTLSTQLGD 254
SNS D + T + +PLLNN V S T ST D
Sbjct: 162 SNSPDSSTTAVTTSQITAFQPLLNNFVSST--TASTSRPD 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,126,843
Number of Sequences: 27780
Number of extensions: 313488
Number of successful extensions: 815
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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