Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30094
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49734| Best HMM Match : SapB_2 (HMM E-Value=0) 55 6e-08
SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13) 40 0.002
SB_10103| Best HMM Match : SapB_2 (HMM E-Value=2.6e-12) 38 0.009
SB_25420| Best HMM Match : PFEMP (HMM E-Value=7.4) 31 1.1
SB_47698| Best HMM Match : SapB_2 (HMM E-Value=1.5e-06) 30 1.4
SB_36848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4) 29 2.5
SB_53315| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8) 28 5.8
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_6700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 7.6
SB_49645| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_49734| Best HMM Match : SapB_2 (HMM E-Value=0)
Length = 457
Score = 54.8 bits (126), Expect = 6e-08
Identities = 21/72 (29%), Positives = 45/72 (62%)
Frame = +3
Query: 42 SNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEML 221
+ C LC F +++L+ +L N +++ I +A++ +C+ L ++S+C FV Y L+E+L
Sbjct: 217 TECVLCEFVMKELDDMLSKNSTQQEIIQAVEKVCSILPSTIKSKCDQFVQEYGPALIEIL 276
Query: 222 VADMNAKEICVS 257
+++ K +C +
Sbjct: 277 EQEVSPKLVCTT 288
Score = 44.4 bits (100), Expect = 8e-05
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 507 EEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVI 647
+E+DD + EI +AV +C +P ++ ++CDQFV++Y +I
Sbjct: 227 KELDDMLSKNSTQQEIIQAVEKVCSILPSTIKSKCDQFVQEYGPALI 273
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 27 VNSEKSNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQ 206
V C +C + L++ L NN ++E I L+ +C L ++ SEC V Y S
Sbjct: 308 VIGSNETCEICTTVMTYLKAFLNNNATDEEIVNFLEKVCNYLPSQIASECNAIVSEYGST 367
Query: 207 LVEMLVADMNAKEIC 251
+++ ++A+ + +C
Sbjct: 368 VLQ-IIANTDPTTLC 381
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 27 VNSEKSNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQ 206
V S K C C V+ + ++ + ++ I + CT L + SEC V+TY
Sbjct: 18 VVSPKDECTTCKELVKTIYTMASDPTAQNQILSLIKDACTFLGPEA-SECKSLVETYGKA 76
Query: 207 LVEMLVADM-NAKEIC 251
+++++++ + N ++C
Sbjct: 77 IIQLILSQLSNPDQVC 92
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +3
Query: 525 IKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVI 647
+ + D+EI + +C ++P +++EC+ V +Y V+
Sbjct: 329 LNNNATDEEIVNFLEKVCNYLPSQIASECNAIVSEYGSTVL 369
>SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13)
Length = 492
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 39 KSNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEM 218
+ C +C V +++ L + E ++ LD +C + EC VDTY + ++
Sbjct: 394 QDTCAICEAVVGKVKDALDDKSMEGKVKAILDEICDKDGGFFAGECKKVVDTYFTMIISQ 453
Query: 219 L-VADMNAKEICVS 257
L + N K++C +
Sbjct: 454 LDIILQNPKQVCTT 467
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 510 EIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVIS 650
++ D + DK + ++K + IC + EC + V+ Y ++IS
Sbjct: 406 KVKDALDDKSMEGKVKAILDEICDKDGGFFAGECKKVVDTYFTMIIS 452
>SB_10103| Best HMM Match : SapB_2 (HMM E-Value=2.6e-12)
Length = 105
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 27 VNSEKSNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQ 206
V S K C C V+ + ++ + ++ I + CT L + SEC V+TY
Sbjct: 6 VMSPKDECTTCKELVKTIYTMASDPTAQNQILSLIKDACTFLGPEA-SECRSLVETYGKA 64
Query: 207 LVEMLVADM-NAKEIC 251
+++++++ + N ++C
Sbjct: 65 IIQLILSQLSNPDQVC 80
>SB_25420| Best HMM Match : PFEMP (HMM E-Value=7.4)
Length = 217
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 474 EQRLCSLRIRPEEIDDQ-IKDKHNDDEIKKAVHGICKHMPKSVSAECDQF-VEKYADLVI 647
E+R +R+R ++DD+ +KD + +K G CKH S C F + K+ +I
Sbjct: 159 EERARKMRVRSVDLDDEELKDSTKERNLKHFTVGECKH---KFSLPCQCFLIAKFLKKLI 215
Query: 648 S 650
S
Sbjct: 216 S 216
>SB_47698| Best HMM Match : SapB_2 (HMM E-Value=1.5e-06)
Length = 175
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +3
Query: 546 DEIKKAVHGICKHMPKSVSAECDQFVEKYADLVI 647
+EI + +C ++P +++EC+ V +Y V+
Sbjct: 1 EEIVNFLEKVCNYLPSQIASECNAIVSEYGSTVL 34
>SB_36848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 161 TAERVHRLRGHVLESARRDAGGRHEREGDLRVLKLCRDQLHDPLKLTHSSID 316
TAE + E R+ G + E E +VL R Q+HD +++ S+D
Sbjct: 389 TAENIEEAAQKYTELRRQKEGDQEEEEQIKKVLAESRSQVHDDDEMSDESMD 440
>SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4)
Length = 361
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 274 PTARSPQADPLVHRQVPREXTLRGDRNNHRKKSLLPKHMLVSEFSDVETNEILDDTV 444
P R P + QV E ++ D +H++ + LPK + V + E + +DT+
Sbjct: 273 PKHRRPPSRVRTSSQVSTEPPIKKDPTHHKRSTTLPKDLKVHTTAQ-EKKSVAEDTI 328
>SB_53315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 168 SECIDFVDTYSSQLVEMLVADMNAKEICVS 257
++C FV+TY +++++L ++N +C S
Sbjct: 112 TQCASFVNTYEEEVLKILSQELNPDMVCTS 141
>SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 525 IKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISS 653
I+DK +DEI H + H K+++ CD+ EK A + +S
Sbjct: 890 IQDKAVEDEISNECHNLLWHYKKNLT--CDERFEKAAQQMCAS 930
>SB_7395| Best HMM Match : SURF6 (HMM E-Value=1.8)
Length = 1365
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 PEAVSGPTARSPQADPLVHRQVPREXTLRGDRNN-HRKKSLLPKHMLVSEFSDVETNEIL 432
P +VSGP + L+ VP TLR + H K+ + + + + DV +
Sbjct: 728 PRSVSGPQEKKEDVFTLIDELVPVMVTLREKADEAHVKEEKVKRRFSIEDDEDV-FDRRA 786
Query: 433 DDTVNGRRVSHKSQ 474
D+T+ RR K++
Sbjct: 787 DNTLPRRRSFRKTR 800
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 1 KQKKSAESTSILKNLTAPCASSPLNN*NRCSR 96
K++ AE ++ PCASSP N CS+
Sbjct: 4986 KERNPAELKGLIAQDLDPCASSPCKNGGTCSK 5017
>SB_6700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 241 RRSACPEAVSGPTARSPQADP-LVHRQVPREXTLRGDRNNHRKKSLLP 381
+++ A++ P+ R P + RQ+ R LR + NNH+K +P
Sbjct: 35 KKALISAAMNSPSLRKRGYKPAFLKRQILRIDALRPNNNNHKKSRRIP 82
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/68 (33%), Positives = 28/68 (41%)
Frame = +2
Query: 170 RVHRLRGHVLESARRDAGGRHEREGDLRVLKLCRDQLHDPLKLTHSSIDKFHAXRH*EAT 349
R H LR H E R +GGRHERE D R + HS K RH +
Sbjct: 226 RSHSLR-HEDEEERSPSGGRHERE-DSREPSSAEES--SRTSSPHSRKKKSRKHRHRSRS 281
Query: 350 GTTTGRSR 373
+ + R R
Sbjct: 282 SSLSSRRR 289
>SB_49645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 137 SLHAALPETAERVHRLRGHVLESARRDAGGRH-EREGDLRVLKLCRDQLHDPLKLTHSSI 313
SL A L E + +LE R +H +RE D +K +D+LH+ L + S
Sbjct: 205 SLQAQLEEQTKTAKEQTDALLEDRRVRMEEQHAQRERDADKIKTLQDKLHNTQSLLYEST 264
Query: 314 DKF 322
F
Sbjct: 265 KDF 267
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,895,070
Number of Sequences: 59808
Number of extensions: 383469
Number of successful extensions: 1307
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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