Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30094
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like pr...    39   0.003
AC006833-9|AAF60943.1|  318|Caenorhabditis elegans Saposin-like ...    36   0.033
Z66567-4|CAA91493.2|  618|Caenorhabditis elegans Hypothetical pr...    35   0.058
U40417-6|AAA81415.2|   90|Caenorhabditis elegans Saposin-like pr...    31   0.71 
Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U38937-1|AAA93079.1|  441|Caenorhabditis elegans LIN-1 protein.        28   5.0  
U38935-1|AAB60254.1|  441|Caenorhabditis elegans LIN-1 protein.        28   5.0  
AF067606-1|AAC17530.3|  441|Caenorhabditis elegans Abnormal cell...    28   5.0  
AF016424-7|AAB65329.3|  520|Caenorhabditis elegans Hypothetical ...    27   8.8  

>U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like
           protein family protein10, isoform b protein.
          Length = 429

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
 Frame = +3

Query: 45  NCPLCLFAVEQLESVLKNNRSE--ENIRKALDGLCTRL-SQKLQSECIDFVDTYSSQLVE 215
           +C  C F VE +++ +  NR +  +++R   D  C ++ +  +   CIDF+D Y   +++
Sbjct: 261 SCFECKFVVEDMQTDMITNRKKLSDDVR---DFACYKIVTANMTDSCIDFLDLYLPTVIQ 317

Query: 216 MLVADMNAKEICVS*SC 266
           M V     + +C++  C
Sbjct: 318 MTVEQATPQGVCLANKC 334


>AC006833-9|AAF60943.1|  318|Caenorhabditis elegans Saposin-like
           protein family protein7 protein.
          Length = 318

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 33  SEKSNCP--LCLFAVEQLESVLKNN--RSEENIRKALDGLCTRLSQKLQSECIDFVDTYS 200
           S   N P  L  F   QL SV K+    SE  +R  L   C  L    + +C  FV+T  
Sbjct: 37  SPNGNTPSNLGCFMCTQLLSVTKHRVGLSENQLRNQLYEKCRVLPSVFKEQCFAFVETSL 96

Query: 201 SQLVEMLVADMNAKEICV 254
            ++   +  D+++K++CV
Sbjct: 97  PEIYYSINYDISSKDVCV 114


>Z66567-4|CAA91493.2|  618|Caenorhabditis elegans Hypothetical
           protein ZK455.4 protein.
          Length = 618

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +3

Query: 33  SEKSNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLV 212
           + K +C  C FAV+ +++++  N ++  I   L  LC     +    C + +  +  ++V
Sbjct: 67  NRKMSCLFCTFAVDGVQALIAQNSTDNEIAAFLVNLCDLFDVEQPHVCKNIIYAFKDEVV 126

Query: 213 EMLVADM-NAKEIC 251
            +L   +   +EIC
Sbjct: 127 FVLERSVFTPEEIC 140


>U40417-6|AAA81415.2|   90|Caenorhabditis elegans Saposin-like
           protein family protein6 protein.
          Length = 90

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +3

Query: 45  NCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQ---SECIDFVDTYSSQLVE 215
           +C +C  AV+  +     ++   +I+K  D  C +    +Q    EC  +VD     +++
Sbjct: 14  DCEMCKLAVKSADG--DADKDTNDIKKDFDAKCKKAFHSIQFAPRECEHYVDKKLDPIIK 71

Query: 216 MLVADMNAKEIC 251
            L +  + K++C
Sbjct: 72  ELESGTSPKDVC 83


>Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical
           protein F16A11.1 protein.
          Length = 673

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 45  NCPLCLFAVEQLESVLKNNRSEENIR 122
           +CPLC   +E+     KNNRS +N++
Sbjct: 594 HCPLCRKPIEERIQKTKNNRSFDNVK 619


>U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical
           protein F56D1.1 protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 6   EEIRRVDVNSEKSNCPLCLFAVEQLE 83
           +E R  D NSE+SN  +C+  VE++E
Sbjct: 35  DEYREEDGNSERSNSKVCIEEVEEVE 60


>U38937-1|AAA93079.1|  441|Caenorhabditis elegans LIN-1 protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 78  LESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMN 236
           +E +L   + E N+    D +CTR S    S  +D + T    L+E+L  D N
Sbjct: 30  IEGILDIRKKEMNVS---DLMCTRSSTPPTSSSVDSIITLWQFLLELLQQDQN 79


>U38935-1|AAB60254.1|  441|Caenorhabditis elegans LIN-1 protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 78  LESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMN 236
           +E +L   + E N+    D +CTR S    S  +D + T    L+E+L  D N
Sbjct: 30  IEGILDIRKKEMNVS---DLMCTRSSTPPTSSSVDSIITLWQFLLELLQQDQN 79


>AF067606-1|AAC17530.3|  441|Caenorhabditis elegans Abnormal cell
           lineage protein 1 protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 78  LESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMN 236
           +E +L   + E N+    D +CTR S    S  +D + T    L+E+L  D N
Sbjct: 30  IEGILDIRKKEMNVS---DLMCTRSSTPPTSSSVDSIITLWQFLLELLQQDQN 79


>AF016424-7|AAB65329.3|  520|Caenorhabditis elegans Hypothetical
           protein F39G3.3 protein.
          Length = 520

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 525 IKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVI 647
           +++K  + E  K      KH   S  AECD+F  KY +  I
Sbjct: 378 LQEKKEEAEAAKRREARKKHEDYSKQAECDEFFLKYLNPAI 418


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,664,877
Number of Sequences: 27780
Number of extensions: 274930
Number of successful extensions: 1118
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)