Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30094
         (654 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g62290.1 68414.m07027 aspartyl protease family protein contai...    32   0.29 
At1g06980.1 68414.m00743 expressed protein similar to hypothetic...    30   1.2  
At4g30060.1 68417.m04276 expressed protein contains Pfam profile...    30   1.5  
At3g04420.1 68416.m00468 no apical meristem (NAM) family protein...    29   2.0  
At5g54690.1 68418.m06811 glycosyl transferase family 8 protein c...    28   4.7  
At3g46750.1 68416.m05075 hypothetical protein                          28   4.7  
At5g17660.1 68418.m02070 expressed protein contains Pfam profile...    28   6.2  
At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to ca...    27   8.2  

>At1g62290.1 68414.m07027 aspartyl protease family protein contains
           Pfam profiles: PF00026 eukaryotic aspartyl protease,
           PF03489 surfactant protein B, PF05184 saposin-like type
           B, region 1
          Length = 513

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 42  SNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLSQKLQSECID 182
           + CP C  AV  ++S L+ N ++E I   ++ +C R+        +D
Sbjct: 385 AGCPACEMAVVWIQSQLRQNMTQERIVNYINEICERMPSPNGESAVD 431


>At1g06980.1 68414.m00743 expressed protein similar to hypothetical
           protein GI:2347189 from [Arabidopsis thaliana]
          Length = 169

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +2

Query: 197 LESARRDAGGRHEREGDLRVLKLCRDQLHDPLKLTHSSIDKFHAXRH*EATGTTTGR 367
           L++   DA GR E +GD   +KLC   L + +    +  +  H  RH  +   +T R
Sbjct: 103 LQNPSADAAGR-EIKGDEECVKLCEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWR 158


>At4g30060.1 68417.m04276 expressed protein contains Pfam profile
           PF03267: Arabidopsis protein of unknown function, DUF266
          Length = 401

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -3

Query: 322 ELVYGRVGQLEGIVQLVPTQLQDT-QISFAFMSATSISTS*LEYVSTKSMHSLCSF 158
           E+V+GR+  ++   +L+   L+DT    F  +S + +     EY+    MHS  S+
Sbjct: 164 EVVWGRISMVDAERRLLANALRDTSNQQFVLLSDSCVPLRSFEYIYNYLMHSNLSY 219


>At3g04420.1 68416.m00468 no apical meristem (NAM) family protein
           similar to  NAC1 (GI:7716952) {Medicago truncatula};
           contains Pfam PF02365 : No apical meristem (NAM) protein
          Length = 342

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 298 DPLVHRQVPREXTLRGDRNNHRKKSLLPKHMLVSEFSDVETNEILDDTVN 447
           D  V  QV     ++ DRNNHR +  L   ++     D + +++L  T N
Sbjct: 203 DDGVDEQVNHIMNMKDDRNNHRPQKPLTGVLIDDSSDDDDDSDLLSPTTN 252


>At5g54690.1 68418.m06811 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8
          Length = 535

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -1

Query: 480 VALRLVRDAATVHRVVQDLVRFDVTEFRNQHVFGQKRLLPVVVPVASQCRFAW 322
           VA  LV++A   H++V  ++    T F  Q  F    L P ++ V +   F W
Sbjct: 224 VAKSLVQNALRPHKIVLHIITDRKTYFPMQAWFSLHPLSPAIIEVKALHHFDW 276


>At3g46750.1 68416.m05075 hypothetical protein 
          Length = 415

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 110 GEHSQGSGRSLHAALPETAERVHRLRGHVLESARRDAGGRHEREGDLRVLKLCRDQLHDP 289
           GEHS    +SL + + + A+++     H L + +R     H+ EGD  +   CR + H+ 
Sbjct: 53  GEHSHHK-KSLFSKMKDKAKKLQ----HSLSTKKR-----HDEEGDATMSPFCRSEDHEV 102

Query: 290 LKLTHSSI 313
            ++ ++S+
Sbjct: 103 REVGYASL 110


>At5g17660.1 68418.m02070 expressed protein contains Pfam profile
           PF02390: Putative methyltransferase
          Length = 312

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 168 SECIDFVDTYSSQLVEMLVADMN 236
           S C+DF D  S++LVE+  A++N
Sbjct: 60  SVCVDFKDLRSNELVELEYAELN 82


>At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to
           calcium-binding protein annexin 6 [Arabidopsis thaliana]
           GI:12667518
          Length = 318

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 287 DRAVGPDTASGHADLLRVHVGHQH 216
           DRA+  DT+  + D+L   +GH H
Sbjct: 294 DRAIANDTSGDYKDMLLALLGHDH 317


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,790,778
Number of Sequences: 28952
Number of extensions: 249188
Number of successful extensions: 932
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)