Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30093
(501 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 3e-31
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 120 5e-28
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 3e-21
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 85 3e-17
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09) 81 5e-16
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09) 75 3e-14
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 75 3e-14
SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14) 75 4e-14
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05) 65 4e-11
SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39) 55 3e-08
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_59112| Best HMM Match : Peptidase_C1 (HMM E-Value=1.3) 49 2e-06
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 28 5.0
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_3781| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 131 bits (317), Expect = 3e-31
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +1
Query: 4 GFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVG 183
GFVDIP GDE L +A+A+VGP+S+AIDAS ++F Y GVY++ +CSST LDHGVL VG
Sbjct: 225 GFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQGVYDDPDCSSTRLDHGVLAVG 284
Query: 184 YGTDEQGVDYWLVKNSWGRSWGE 252
YGTD+ G DYWLVKNSWG SWGE
Sbjct: 285 YGTDD-GKDYWLVKNSWGPSWGE 306
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 234 GPLVGRAGYIKMIRNKNNRCGIASSXSYPLV 326
GP G GYIK+ RN +++CG+AS SYPLV
Sbjct: 301 GPSWGEEGYIKIARNDHDKCGVASKASYPLV 331
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 120 bits (290), Expect = 5e-28
Identities = 57/82 (69%), Positives = 64/82 (78%)
Frame = +1
Query: 4 GFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVG 183
G+ DIP+G EQ L AVATVGPVSVA+DAS +Q YSSGVY+ CSST LDHGVLV+G
Sbjct: 153 GYQDIPQGSEQALQSAVATVGPVSVAVDASQ--WQFYSSGVYDNPYCSSTQLDHGVLVIG 210
Query: 184 YGTDEQGVDYWLVKNSWGRSWG 249
YG + G DYWLVKNSWG SWG
Sbjct: 211 YG-NYNGQDYWLVKNSWGYSWG 231
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3
Query: 246 GRAGYIKMIRNKNNRCGIASSXSYPL 323
G GYI M RNKNN+CGIASS SYPL
Sbjct: 231 GVEGYIMMSRNKNNQCGIASSASYPL 256
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +1
Query: 4 GFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEEC--SSTDLDHGVLV 177
G+V+I EGD L A+A GP+SV+IDASH S YS GVY E +C + DLDH VL
Sbjct: 751 GYVNITEGDLSALKTAIAQKGPISVSIDASHKSLSFYSYGVYYEPKCGNKNEDLDHSVLA 810
Query: 178 VGYGTDEQGVDYWLVKNSWGRSWG 249
VGYGT + G YW++KNSW WG
Sbjct: 811 VGYGTMD-GKPYWMIKNSWSTHWG 833
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 85.0 bits (201), Expect = 3e-17
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +1
Query: 16 IPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTD 195
+P+ ++ L +A GP S+AI+ + S + YS GVY++ +C + +HGV+VVGYG
Sbjct: 127 VPKYNQTALRRGLALYGPASIAINVNRKSLKFYSGGVYDDPQC-PPNTNHGVVVVGYGV- 184
Query: 196 EQGVDYWLVKNSWGRSWGE 252
E+G YW+VKNSWG+ WGE
Sbjct: 185 EEGQPYWIVKNSWGKFWGE 203
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 85.0 bits (201), Expect = 3e-17
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +1
Query: 7 FVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGY 186
++ I +G+ +L AVA GPVS+ ++ +F+ Y SG+Y + +C+ LDH L VGY
Sbjct: 611 YMSIRKGNTTQLKLAVAFYGPVSILVNTQPKTFKFYGSGIYYDTQCTHA-LDHAALAVGY 669
Query: 187 GTDEQGVDYWLVKNSWGRSWGE 252
G +E+GV YW+VKNSW WGE
Sbjct: 670 G-EEKGVPYWIVKNSWSAMWGE 690
Score = 49.2 bits (112), Expect = 2e-06
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 160 DHGVLVVGYGTDEQGVDYWLVKNSWGRSWG 249
DH VL++GYG+D GV YWL+KN W WG
Sbjct: 1425 DHAVLLIGYGSDN-GVPYWLIKNFWSHKWG 1453
>SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09)
Length = 160
Score = 81.0 bits (191), Expect = 5e-16
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +1
Query: 4 GFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVG 183
GF+ + + + L A+AT GP++ +++A +F+ YS G+Y++ +C +H VL +G
Sbjct: 19 GFMRVKKHNPTLLKFALATHGPIASSLNADQKTFRFYSHGIYDDPKCGRKT-NHAVLTIG 77
Query: 184 YGTDEQGVDYWLVKNSWGRSWGE 252
YG+ YWL+KNSWG WGE
Sbjct: 78 YGSQHSNASYWLIKNSWGHLWGE 100
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 75.4 bits (177), Expect = 3e-14
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +1
Query: 40 LMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWL 219
L +A++ GP +++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D GV YWL
Sbjct: 271 LKKALSYHGPATISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSDN-GVPYWL 328
Query: 220 VKNSWGRSWG 249
+KNSW WG
Sbjct: 329 IKNSWSHKWG 338
>SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09)
Length = 817
Score = 75.4 bits (177), Expect = 3e-14
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +1
Query: 40 LMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWL 219
L +A++ GP +++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D GV YWL
Sbjct: 29 LKKALSYHGPATISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSDN-GVPYWL 86
Query: 220 VKNSWGRSWG 249
+KNSW WG
Sbjct: 87 IKNSWSHKWG 96
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 75.4 bits (177), Expect = 3e-14
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +1
Query: 40 LMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWL 219
L +A++ GP +++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D GV YWL
Sbjct: 393 LKKALSYHGPATISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSDN-GVPYWL 450
Query: 220 VKNSWGRSWG 249
+KNSW WG
Sbjct: 451 IKNSWSHKWG 460
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 75.4 bits (177), Expect = 3e-14
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +1
Query: 40 LMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWL 219
L +A++ GP +++I+A+ S + YS G+ +++ CS+ DH VL++GYG+D GV YWL
Sbjct: 128 LKKALSYHGPATISINANPKSLKFYSDGIMSDKHCSNKT-DHAVLLIGYGSDN-GVPYWL 185
Query: 220 VKNSWGRSWG 249
+KNSW WG
Sbjct: 186 IKNSWSHKWG 195
>SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14)
Length = 183
Score = 74.5 bits (175), Expect = 4e-14
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +1
Query: 40 LMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWL 219
L +A++ GP +++I+A+ S + YS G+ +++ CS+ DH VL++GYG+ E GV YWL
Sbjct: 57 LKKALSYHGPATISINANPKSLKYYSDGIMSDKHCSNKT-DHAVLLIGYGS-ENGVPYWL 114
Query: 220 VKNSWGRSWG 249
+KNSW WG
Sbjct: 115 IKNSWSNKWG 124
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +1
Query: 4 GFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYN 132
GFVD+ GDE+ L A TVGP+SVAIDA H SFQ Y SGVYN
Sbjct: 443 GFVDVTHGDEEALKTAAGTVGPISVAIDAGHMSFQFYHSGVYN 485
>SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05)
Length = 110
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +1
Query: 37 KLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYW 216
++M + GP++ I+A+ + + Y+ GVY E + + ++H V VVG+G D+ GV+YW
Sbjct: 8 RMMAEIFARGPIACGIEAT-SRLEQYTGGVYTEYD-PNPQINHIVSVVGWGVDD-GVEYW 64
Query: 217 LVKNSWGRSWGE 252
+V+NSWG WGE
Sbjct: 65 VVRNSWGTPWGE 76
>SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 63.7 bits (148), Expect = 8e-11
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +1
Query: 142 CSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWG 249
CSST LDH +LVVGYG + G DYWLVKNSWG WG
Sbjct: 3 CSSTQLDHAILVVGYGNNN-GQDYWLVKNSWGTGWG 37
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3
Query: 246 GRAGYIKMIRNKNNRCGIASSXSYPLV 326
G +GYI M RNK+N+CGIASS SYPLV
Sbjct: 37 GMSGYILMSRNKDNQCGIASSASYPLV 63
>SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39)
Length = 504
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +1
Query: 28 DEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEE--CSSTDLDHGVLVVGYGTDEQ 201
DE+++ +A GP+S+ I+A+ + Q Y G+ + + C+ + L+HGVL+VGYG +
Sbjct: 335 DEKEIAAWLAKNGPISIGINAN--AMQFYMGGIAHPWKIFCNPSSLNHGVLIVGYGV-KN 391
Query: 202 GVDYWLVKN 228
G YW++KN
Sbjct: 392 GTPYWIIKN 400
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 51.6 bits (118), Expect = 4e-07
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 160 DHGVLVVGYGTDEQGVDYWLVKNSWGRSWG 249
DH VL++GYG+D GV YWL+KNSW WG
Sbjct: 172 DHAVLLIGYGSDN-GVPYWLIKNSWSHKWG 200
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +1
Query: 118 SGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWG 249
S +Y + SS H VLVVGYG E G YWLVKNSW +WG
Sbjct: 386 SWIYLHDSSSSV---HSVLVVGYGV-EDGEPYWLVKNSWSTTWG 425
>SB_59112| Best HMM Match : Peptidase_C1 (HMM E-Value=1.3)
Length = 82
Score = 49.2 bits (112), Expect = 2e-06
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 163 HGVLVVGYGTDEQGVDYWLVKNSWGRSWG 249
H VL++GYG+D GV YWL+KNSW WG
Sbjct: 24 HAVLLIGYGSDN-GVPYWLIKNSWSHKWG 51
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 95 CEASMATETGPTVATASISFCSS 27
C + M+T++G T +A ISFC S
Sbjct: 734 CPSKMSTKSGATNKSACISFCDS 756
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 276 NKNNRCGIASSXSYPLV*TPPSLPRSCNIHIS 371
N+ RC S SYP++ PS+PR I I+
Sbjct: 521 NRRRRCSAKSGVSYPVI-AKPSVPRLPEIVIT 551
>SB_3781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 104 KLVCEASMATETGPTVATASISFCSSP 24
KL+CE+S T TV A +S S+P
Sbjct: 409 KLLCESSRTTSRSTTVGQAVVSSLSNP 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,487,627
Number of Sequences: 59808
Number of extensions: 165649
Number of successful extensions: 446
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -