Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30092
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   7.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   9.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 152 HPV*VIGSIITMPNYSKISF 93
           HPV + G+   MP+ S I +
Sbjct: 267 HPVAMTGTKTVMPSQSAIKY 286


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 151 TPYKLLEVLSRCRI 110
           T ++ L+ LSRCR+
Sbjct: 672 TDHQALKFLSRCRL 685


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 111 IRHRDNTSNNLYGVTLQGH 167
           IRHR   S  +Y   L GH
Sbjct: 692 IRHRKRWSQVMYMYYLLGH 710


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 111 IRHRDNTSNNLYGVTLQGH 167
           IRHR   S  +Y   L GH
Sbjct: 692 IRHRKRWSQVMYMYYLLGH 710


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 111 IRHRDNTSNNLYGVTLQGH 167
           IRHR   S  +Y   L GH
Sbjct: 692 IRHRKRWSQVMYMYYLLGH 710


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 111 IRHRDNTSNNLYGVTLQGH 167
           IRHR   S  +Y   L GH
Sbjct: 692 IRHRKRWSQVMYMYYLLGH 710


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 217 VFTYIVIVLTTLLCYLCDILIIQYYF 294
           +FT   ++ T    Y   IL+  YYF
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLCVYYF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,601
Number of Sequences: 336
Number of extensions: 1652
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)