Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30092
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   1.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   6.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 126  YHDAELL*DFLPNC*VLRKLYKERCSHNPG 37
            Y   E L D + +  + R LY++R  H+PG
Sbjct: 2017 YQRLEFLGDAILDYLITRHLYEDRRQHSPG 2046


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse
          transcriptase protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 39 QGCDYIVLCTTFLVPNN 89
          +GCD +++   + VPNN
Sbjct: 26 EGCDILIISDPYWVPNN 42


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 144 YGVTLQGHD*HITSVVIKKNFFVPSIYIHSYCF 242
           Y V LQG +  I+  +  +N  +PS   H + F
Sbjct: 595 YDVVLQGGNSSISLPIFAQNQRMPSEESHEFAF 627


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,678
Number of Sequences: 2352
Number of extensions: 6001
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)