Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30091
         (322 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    19   9.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   9.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   9.7  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 267 SSLILSAHTIIIH 229
           +S   +AHT++IH
Sbjct: 362 TSTTFNAHTVLIH 374


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 98  GDYKPELSSRP 66
           GD+ PE++S P
Sbjct: 704 GDHVPEINSNP 714


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 7/29 (24%), Positives = 10/29 (34%)
 Frame = +2

Query: 5   PPLYTGSASKRTARRCLQQPAAGCSIQAC 91
           PP + G   +     CL  P +      C
Sbjct: 287 PPGFVGPRCEGDINECLSNPCSNAGTLDC 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,428
Number of Sequences: 336
Number of extensions: 762
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)