Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30090
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535...    29   3.0  
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396           28   5.2  
02_03_0056 - 14525491-14525833,14525882-14526125,14526447-145265...    28   5.2  
02_02_0537 + 11308195-11309667                                         28   5.2  
01_05_0645 - 23899579-23904483                                         28   5.2  
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069...    28   6.9  

>04_04_1122 +
           31052497-31052629,31053133-31053191,31053285-31053579,
           31054099-31054279,31054739-31054956,31055522-31055739,
           31055842-31055958,31056106-31056128,31056223-31056438,
           31056536-31056677,31056822-31057067,31057659-31057856,
           31058331-31058379,31060835-31060911,31061266-31061551,
           31061661-31061841,31062149-31062344,31062630-31062738,
           31062861-31062961,31063155-31063267,31063347-31063442,
           31063531-31063746,31063857-31063995,31064087-31064332,
           31064605-31064940
          Length = 1396

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 227 IDCAFFVELDHVRHTTGSKHFAADNFL 147
           +DC F+  LD + H    +HFAA +++
Sbjct: 373 LDCPFYATLDRLVHKRNIEHFAAMSYI 399


>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
          Length = 1357

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 353  ASNMRRSASVSRRQDHLHSKPNSFRP---FRERPLYPSQRCGY 234
            +S+ +R  ++ +    LH+ PNSF P    R +P  P + C Y
Sbjct: 1000 SSSTKRHDTIPQTPYILHNHPNSFLPQYILRTQPKAPCRSCAY 1042


>02_03_0056 -
           14525491-14525833,14525882-14526125,14526447-14526591,
           14526757-14527121,14527323-14527722
          Length = 498

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -1

Query: 611 PAWTAAPRNVCRALRYSLLLDDEGSGPLPSRFQQVIKVSGSRPLLPSCRSGALPACS 441
           P WT APR+      ++   +D  SG  PS  +  +  S      PS  SG  P+ S
Sbjct: 363 PGWTQAPRHSIGVSTWASASEDRSSGVPPSLSEWHLSSSRWGDNQPSRSSGVPPSPS 419


>02_02_0537 + 11308195-11309667
          Length = 490

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 353 ASNMRRSASVSRRQDHLHSKPNSFRP---FRERPLYPSQRCGY 234
           +S+ +R  ++ +    LH+ PNSF P    R +P  P + C Y
Sbjct: 158 SSSTKRHDTIPQTPYILHNHPNSFLPQYILRTQPKAPCRSCAY 200


>01_05_0645 - 23899579-23904483
          Length = 1634

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 353  ASNMRRSASVSRRQDHLHSKPNSFRP---FRERPLYPSQRCGY 234
            +S+ +R  ++ +    LH+ PNSF P    R +P  P + C Y
Sbjct: 1277 SSSTKRHDTIPQTPYILHNHPNSFLPQYILRTQPKAPCRSCAY 1319


>03_06_0766 -
           36106116-36106230,36106598-36106716,36106880-36106960,
           36107062-36107118,36107350-36107373,36107810-36107909,
           36107983-36108053,36108132-36108236,36108674-36108847,
           36109406-36109555,36109701-36109871,36109968-36110024,
           36110107-36110142,36110165-36110357,36110439-36110578,
           36110960-36111166,36111442-36111498,36111711-36111809,
           36112289-36112408,36112865-36113032,36113450-36113510,
           36113611-36113720,36114132-36114263,36114344-36114511,
           36115118-36115182,36115242-36115372,36115450-36115487,
           36116272-36116373,36116480-36116537,36117479-36117580,
           36117695-36117909,36118158-36118307,36118699-36118858,
           36118984-36119042,36119287-36119443,36119536-36119681,
           36121376-36121648,36122889-36122891
          Length = 1457

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 225 RLCLLRRARPRTPYDREQTFRCGQLSCSFVLESCQKY 115
           R  LL R+R     D E+ + C  + C+   E C+KY
Sbjct: 235 RTYLLERSRVCQISDPERNYHCFYMLCAAPSEDCKKY 271


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,754,553
Number of Sequences: 37544
Number of extensions: 275801
Number of successful extensions: 918
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)