Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30090
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069471-1|AAL39616.1|  557|Drosophila melanogaster LD21347p pro...    62   4e-10
AE014297-875|AAF54336.1|  557|Drosophila melanogaster CG18005-PA...    62   4e-10

>AY069471-1|AAL39616.1|  557|Drosophila melanogaster LD21347p
           protein.
          Length = 557

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 28/56 (50%), Positives = 44/56 (78%)
 Frame = +3

Query: 105 MGKNIFDMILEQKNKKVVRSEMFAPGRMAYVVELDEEGTIDSDIPTTLTRVKRTFP 272
           + +NI++++  +++K+V R+E+FAPGRMAYV++LD+E   +SDIPTTL R K   P
Sbjct: 231 LARNIYNLVQARRSKEVPRNELFAPGRMAYVIDLDDE-LGESDIPTTLKRSKFEVP 285



 Score = 35.5 bits (78), Expect = 0.058
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 257 KADVPEMDERSSASSANDLVVEKLTQIFSYLRHG 358
           K +VP   E  +  + ND+V+ KL+QI SYLR G
Sbjct: 281 KFEVPVSQEDVATLTTNDIVINKLSQILSYLRAG 314


>AE014297-875|AAF54336.1|  557|Drosophila melanogaster CG18005-PA
           protein.
          Length = 557

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 28/56 (50%), Positives = 44/56 (78%)
 Frame = +3

Query: 105 MGKNIFDMILEQKNKKVVRSEMFAPGRMAYVVELDEEGTIDSDIPTTLTRVKRTFP 272
           + +NI++++  +++K+V R+E+FAPGRMAYV++LD+E   +SDIPTTL R K   P
Sbjct: 231 LARNIYNLVQARRSKEVPRNELFAPGRMAYVIDLDDE-LGESDIPTTLKRSKFEVP 285



 Score = 35.5 bits (78), Expect = 0.058
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 257 KADVPEMDERSSASSANDLVVEKLTQIFSYLRHG 358
           K +VP   E  +  + ND+V+ KL+QI SYLR G
Sbjct: 281 KFEVPVSQEDVATLTTNDIVINKLSQILSYLRAG 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,960,792
Number of Sequences: 53049
Number of extensions: 437824
Number of successful extensions: 1319
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)