Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30085
(428 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 116 3e-26
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 116 3e-26
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 116 3e-26
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 116 3e-26
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 116 3e-26
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 116 3e-26
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 116 3e-26
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 116 3e-26
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 116 3e-26
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 116 3e-26
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 95 1e-19
BC022001-1|AAH22001.1| 178|Homo sapiens PEST proteolytic signal... 29 8.8
BC013916-1|AAH13916.1| 130|Homo sapiens PCNP protein protein. 29 8.8
AK222978-1|BAD96698.1| 178|Homo sapiens PEST-containing nuclear... 29 8.8
AB037675-1|BAB03501.1| 178|Homo sapiens PEST-containing nuclear... 29 8.8
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 116 bits (279), Expect = 3e-26
Identities = 56/79 (70%), Positives = 62/79 (78%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG VRTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEEERE
Sbjct: 61 IQRGPVRGISIKLQEEERE 79
Score = 72.9 bits (171), Expect = 4e-13
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 81 RDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 94.7 bits (225), Expect = 1e-19
Identities = 46/79 (58%), Positives = 55/79 (69%)
Frame = +2
Query: 17 MGXVRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 196
MG V TKT+ EKYY L DF TNK +C+EIAIIP+K L NK AG+ THLM++
Sbjct: 1 MGHVCTKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQ 60
Query: 197 LRHSQVRGISIKLQEEERE 253
++ VRGISIKLQEE RE
Sbjct: 61 IQRGPVRGISIKLQEEVRE 79
Score = 72.1 bits (169), Expect = 7e-13
Identities = 30/42 (71%), Positives = 38/42 (90%)
Frame = +1
Query: 256 RDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 381
RDNYVPE+SAL+ +IIEVDPDTK+MLK+LDF ++ LQ+TQP
Sbjct: 81 RDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
>BC022001-1|AAH22001.1| 178|Homo sapiens PEST proteolytic signal
containing nuclear protein protein.
Length = 178
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 122 EEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKL-QEEERESVTTMSQKCL 283
EE A +PTKP + GFA + S ISIKL + +E+V T++ K L
Sbjct: 56 EEAADLPTKPTKISKFGFAIGSQTTKKAS---AISIKLGSSKPKETVPTLAPKTL 107
>BC013916-1|AAH13916.1| 130|Homo sapiens PCNP protein protein.
Length = 130
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 122 EEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKL-QEEERESVTTMSQKCL 283
EE A +PTKP + GFA + S ISIKL + +E+V T++ K L
Sbjct: 56 EEAADLPTKPTKISKFGFAIGSQTTKKAS---AISIKLGSSKPKETVPTLAPKTL 107
>AK222978-1|BAD96698.1| 178|Homo sapiens PEST-containing nuclear
protein variant protein.
Length = 178
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 122 EEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKL-QEEERESVTTMSQKCL 283
EE A +PTKP + GFA + S ISIKL + +E+V T++ K L
Sbjct: 56 EEAADLPTKPTKISKFGFAIGSQTTKKAS---AISIKLGSSKPKETVPTLAPKTL 107
>AB037675-1|BAB03501.1| 178|Homo sapiens PEST-containing nuclear
protein protein.
Length = 178
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 122 EEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKL-QEEERESVTTMSQKCL 283
EE A +PTKP + GFA + S ISIKL + +E+V T++ K L
Sbjct: 56 EEAADLPTKPTKISKFGFAIGSQTTKKAS---AISIKLGSSKPKETVPTLAPKTL 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,134,705
Number of Sequences: 237096
Number of extensions: 1009577
Number of successful extensions: 1946
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1946
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -