Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30084
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142671-1|AAI42672.1|  896|Homo sapiens solute carrier family 9...    30   6.6  
AF111173-1|AAC98696.1|  896|Homo sapiens sodium/hydrogen exchang...    30   6.6  
AB209203-1|BAD92440.1|  394|Homo sapiens solute carrier family 9...    30   6.6  

>BC142671-1|AAI42672.1|  896|Homo sapiens solute carrier family 9
           (sodium/hydrogen exchanger), member 5 protein.
          Length = 896

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 22/90 (24%), Positives = 41/90 (45%)
 Frame = +3

Query: 138 IADHGHTRPQDWRWKEFESSRWIQ*AFRRAAWREETN*RSETLRGTLQKTDDSCVNFVEG 317
           +  HG+   +D RW++F+     Q   RR+A+R          R  ++      ++FV+ 
Sbjct: 488 VGHHGYHYWRD-RWEQFDKKYLSQLLMRRSAYRIRDQIWDVYYRLNIR----DAISFVD- 541

Query: 318 TGGYVFSSTNFEKLNAPQQKQFIQTAANTI 407
            GG+V SST     + P +    +T+   +
Sbjct: 542 QGGHVLSSTGLTLPSMPSRNSVAETSVTNL 571


>AF111173-1|AAC98696.1|  896|Homo sapiens sodium/hydrogen exchanger
           isoform 5 protein.
          Length = 896

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 22/90 (24%), Positives = 41/90 (45%)
 Frame = +3

Query: 138 IADHGHTRPQDWRWKEFESSRWIQ*AFRRAAWREETN*RSETLRGTLQKTDDSCVNFVEG 317
           +  HG+   +D RW++F+     Q   RR+A+R          R  ++      ++FV+ 
Sbjct: 488 VGHHGYHYWRD-RWEQFDKKYLSQLLMRRSAYRIRDQIWDVYYRLNIR----DAISFVD- 541

Query: 318 TGGYVFSSTNFEKLNAPQQKQFIQTAANTI 407
            GG+V SST     + P +    +T+   +
Sbjct: 542 QGGHVLSSTGLTLPSMPSRNSVAETSVTNL 571


>AB209203-1|BAD92440.1|  394|Homo sapiens solute carrier family 9
           (sodium/hydrogen exchanger), isoform 5 variant protein.
          Length = 394

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 22/90 (24%), Positives = 41/90 (45%)
 Frame = +3

Query: 138 IADHGHTRPQDWRWKEFESSRWIQ*AFRRAAWREETN*RSETLRGTLQKTDDSCVNFVEG 317
           +  HG+   +D RW++F+     Q   RR+A+R          R  ++      ++FV+ 
Sbjct: 250 VGHHGYHYWRD-RWEQFDKKYLSQLLMRRSAYRIRDQIWDVYYRLNIR----DAISFVD- 303

Query: 318 TGGYVFSSTNFEKLNAPQQKQFIQTAANTI 407
            GG+V SST     + P +    +T+   +
Sbjct: 304 QGGHVLSSTGLTLPSMPSRNSVAETSVTNL 333


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,553,049
Number of Sequences: 237096
Number of extensions: 1586012
Number of successful extensions: 3373
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3373
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)