Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30084
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    49   5e-06
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    49   5e-06
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    49   5e-06
DQ812095-1|ABH10625.1|   96|Drosophila melanogaster SnoA protein.      29   4.4  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = +3

Query: 267  RGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNAPQQKQFIQTAANTITHKLLSEQLSQLC 446
            R  LQ  +D  ++FV   GG+VF++ NFEKL A  QK+ +    +++   L   ++   C
Sbjct: 3262 RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASDQKKMLNQITSSLADTLFKTEIVSDC 3321

Query: 447  TCTYVDPFRVRSVCVNK 497
             C  +     +  CV K
Sbjct: 3322 RCLPIHGLHGQHKCVIK 3338


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = +3

Query: 267  RGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNAPQQKQFIQTAANTITHKLLSEQLSQLC 446
            R  LQ  +D  ++FV   GG+VF++ NFEKL A  QK+ +    +++   L   ++   C
Sbjct: 985  RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASDQKKMLNQITSSLADTLFKTEIVSDC 1044

Query: 447  TCTYVDPFRVRSVCVNK 497
             C  +     +  CV K
Sbjct: 1045 RCLPIHGLHGQHKCVIK 1061


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = +3

Query: 267  RGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNAPQQKQFIQTAANTITHKLLSEQLSQLC 446
            R  LQ  +D  ++FV   GG+VF++ NFEKL A  QK+ +    +++   L   ++   C
Sbjct: 3262 RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASDQKKMLNQITSSLADTLFKTEIVSDC 3321

Query: 447  TCTYVDPFRVRSVCVNK 497
             C  +     +  CV K
Sbjct: 3322 RCLPIHGLHGQHKCVIK 3338


>DQ812095-1|ABH10625.1|   96|Drosophila melanogaster SnoA protein.
          Length = 96

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/45 (28%), Positives = 27/45 (60%)
 Frame = +2

Query: 323 RLRFLVDQLREVECATAEAVHPDGRQHDHAQAPQRAAVSALYLHL 457
           + + ++DQL+EVE    + +H   R+ +H +   R  + A+Y+H+
Sbjct: 3   KYQIILDQLKEVEL---KEMHKAQRELEHKKRKVRTNIYAIYIHI 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,946,323
Number of Sequences: 53049
Number of extensions: 510504
Number of successful extensions: 1490
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)