Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30081
         (678 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    38   0.013
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    38   0.013
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    33   0.47 
BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p pro...    32   0.83 
AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA ...    32   0.83 

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -3

Query: 643 IMTYASVVFVHAARTNLKPLQVIQSRFCRIAVGAPW 536
           I TY S ++ +A+R+N+  +Q  QSR  RI  GAPW
Sbjct: 793 IWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPW 828


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = -3

Query: 643 IMTYASVVFVHAARTNLKPLQVIQSRFCRIAVGAPW 536
           I TY S ++ +A+R+N+  +Q  QSR  RI  GAPW
Sbjct: 793 IWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPW 828


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 32.7 bits (71), Expect = 0.47
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 643 IMTYASVVFVHAARTNLKPLQVIQSRFCRIAVGAPW 536
           I TY S ++ +A+ +N+  +Q  QS+  R   GAPW
Sbjct: 795 IWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPW 830


>BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p
           protein.
          Length = 2064

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 22/69 (31%), Positives = 28/69 (40%)
 Frame = -3

Query: 445 SSCRGRRKLHTRSCGPNGKQSTTP*ARHFGSTNSAFRYLKHRSPLSSNPSHATKGSVSKL 266
           SSC  R ++   +  P+  Q      + F S   AF Y       SS  S A+  SVS  
Sbjct: 128 SSCYIRERIDRGTISPSAYQQEFEIDKDFSSFEEAFAYKSESCTPSSRQSIASLASVSSC 187

Query: 265 IYGLQPTGS 239
              L P GS
Sbjct: 188 TDTLTPRGS 196


>AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA
           protein.
          Length = 2064

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 22/69 (31%), Positives = 28/69 (40%)
 Frame = -3

Query: 445 SSCRGRRKLHTRSCGPNGKQSTTP*ARHFGSTNSAFRYLKHRSPLSSNPSHATKGSVSKL 266
           SSC  R ++   +  P+  Q      + F S   AF Y       SS  S A+  SVS  
Sbjct: 128 SSCYIRERIDRGTISPSAYQQEFEIDKDFSSFEEAFAYKSESCTPSSRQSIASLASVSSC 187

Query: 265 IYGLQPTGS 239
              L P GS
Sbjct: 188 TDTLTPRGS 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,499,456
Number of Sequences: 53049
Number of extensions: 731321
Number of successful extensions: 1995
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)