Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30080
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 204 4e-53
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 204 4e-53
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 204 4e-53
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 204 4e-53
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 204 4e-53
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 204 4e-53
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 203 8e-53
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 203 8e-53
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 203 8e-53
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 202 2e-52
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 195 2e-50
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 116 2e-26
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 75 4e-14
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 55 4e-08
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 55 5e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.026
U23172-6|AAV58869.1| 484|Caenorhabditis elegans Hypothetical pr... 31 0.99
U23172-5|AAC46527.1| 510|Caenorhabditis elegans Hypothetical pr... 31 0.99
U23172-4|AAL02494.1| 521|Caenorhabditis elegans Hypothetical pr... 31 0.99
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 30 1.3
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 30 1.7
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 30 1.7
AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical ... 30 1.7
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 29 3.0
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.0
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 28 5.3
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 5.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 28 7.0
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 28 7.0
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 28 7.0
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 7.0
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 204 bits (498), Expect = 4e-53
Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 345
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 346 ILASLSTFQQMWISK 360
Score = 177 bits (430), Expect = 8e-45
Identities = 88/99 (88%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 204 bits (498), Expect = 4e-53
Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 345
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 346 ILASLSTFQQMWISK 360
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 204 bits (498), Expect = 4e-53
Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 345
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 346 ILASLSTFQQMWISK 360
Score = 177 bits (430), Expect = 8e-45
Identities = 88/99 (88%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 204 bits (498), Expect = 4e-53
Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKC
Sbjct: 183 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKC 242
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 243 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 301
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 302 ILASLSTFQQMWISK 316
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 98 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 157
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 158 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 193
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 204 bits (498), Expect = 4e-53
Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKC
Sbjct: 213 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKC 272
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 273 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 331
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 332 ILASLSTFQQMWISK 346
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 128 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 187
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 188 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 223
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 204 bits (498), Expect = 4e-53
Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 345
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 346 ILASLSTFQQMWISK 360
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 203 bits (496), Expect = 8e-53
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 345
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 346 ILASLSTFQQMWISK 360
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 203 bits (496), Expect = 8e-53
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 345
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 346 ILASLSTFQQMWISK 360
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 203 bits (496), Expect = 8e-53
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM-KIKIIAPPERKYSVWIGGS 345
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 346 ILASLSTFQQMWISK 360
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 202 bits (493), Expect = 2e-52
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKC
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKC 286
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
D+DIRKDLYANTVLSGGTTMYPGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 287 DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPTM--KIKIIAPPERKYSVWIGGS 344
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 345 ILASLSTFQQMWISK 359
Score = 176 bits (429), Expect = 1e-44
Identities = 87/99 (87%), Positives = 92/99 (92%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVALDFE++ + AA S SL
Sbjct: 202 TTTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 195 bits (476), Expect = 2e-50
Identities = 96/136 (70%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Frame = +1
Query: 253 AEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMK 432
+E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMK
Sbjct: 225 SELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMK 284
Query: 433 CDVDIRKDLYANTVLSGGTTMYPGIATVCKRKSQ-LSPHRQ*RLRSLLLPERKYSVWIGG 609
CDVDIRKDLYANTVLSGGT+M+PGIA +++ Q L+P +++ + PERKYSVWIGG
Sbjct: 285 CDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTM-KIKIIAPPERKYSVWIGG 343
Query: 610 SIPRFLSTSNRCGFSK 657
SI LST + SK
Sbjct: 344 SILASLSTFQQMWISK 359
Score = 168 bits (409), Expect = 3e-42
Identities = 84/99 (84%), Positives = 89/99 (89%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+F
Sbjct: 141 SLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTF 200
Query: 182 TTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSL 298
TTTAEREIVRDIKEKLCYVA DFE + L AA S SL
Sbjct: 201 TTTAEREIVRDIKEKLCYVAHDFESE---LAAAASSSSL 236
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 116 bits (280), Expect = 1e-26
Identities = 50/86 (58%), Positives = 68/86 (79%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F
Sbjct: 145 TLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
+A+ E VR +KEKLCY+A D E++
Sbjct: 205 NHSADFETVRQMKEKLCYIAYDVEQE 230
Score = 92.3 bits (219), Expect = 3e-19
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 11/131 (8%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
E A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+ E + I
Sbjct: 230 EERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQAS 289
Query: 436 DVDIRKDLYANTVLSGGTTMYPGI-ATVCKRKSQL----------SPHRQ*RLRSLLLPE 582
D+D R D Y + VLSGGTTMYPG+ + + K QL ++ ++R P
Sbjct: 290 DIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPS 349
Query: 583 RKYSVWIGGSI 615
RK+ V++GG++
Sbjct: 350 RKHMVFLGGAV 360
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 116 bits (279), Expect = 2e-26
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F
Sbjct: 145 SLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Query: 182 TTTAEREIVRDIKEKLCYVALD 247
+ E EIVR++KE CY+ALD
Sbjct: 205 HRSNEFEIVREMKENACYLALD 226
Score = 98.3 bits (234), Expect = 4e-21
Identities = 52/131 (39%), Positives = 69/131 (52%)
Frame = +1
Query: 265 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 444
T ++S++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD
Sbjct: 228 TKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVD 287
Query: 445 IRKDLYANTVLSGGTTMYPGIATVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSIPRF 624
+R+ LY+N VLSGGTT++ G + + ++R ER WIGGSI
Sbjct: 288 LRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVAS 347
Query: 625 LSTSNRCGFSK 657
L T + K
Sbjct: 348 LDTFRKMWLGK 358
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 75.4 bits (177), Expect = 4e-14
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +2
Query: 26 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 205
TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEV 230
Query: 206 VRDIKEKLCYVALDFERKW 262
+ IKEK CYV D +++
Sbjct: 231 AKMIKEKFCYVCPDVMKEF 249
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Frame = +1
Query: 322 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 498
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 499 PGIATVCKRK-SQLSPHRQ*RLRSL----LLPE-----------RKYSVWIGGSI 615
A +R +LS R +L L P+ ++Y+VW GGS+
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSM 390
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/102 (31%), Positives = 54/102 (52%)
Frame = +1
Query: 328 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 507
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 508 ATVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSIPRFLST 633
A +++ + + P R + ++G I ST
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASAST 529
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +2
Query: 5 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---Y 175
LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+ Y
Sbjct: 315 LYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLY 373
Query: 176 SFTTTAEREIVRDIKEKLCYVALDFERK 259
+F + E+ I+R E+ YV D++++
Sbjct: 374 AFQSPVEKLILRFALEQTTYVPEDYQKE 401
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 322 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 501
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 502 GIATVCKRK 528
G +R+
Sbjct: 323 GFRERLERE 331
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/74 (25%), Positives = 40/74 (54%)
Frame = +2
Query: 32 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 212 DIKEKLCYVALDFE 253
+ KE LC+V+ +F+
Sbjct: 204 ECKEDLCFVSQNFD 217
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 322 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 501
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 502 GIATVCKRK 528
G +R+
Sbjct: 323 GFRERLERE 331
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/74 (25%), Positives = 40/74 (54%)
Frame = +2
Query: 32 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 212 DIKEKLCYVALDFE 253
+ KE LC+V+ +F+
Sbjct: 204 ECKEDLCFVSQNFD 217
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 54.8 bits (126), Expect = 5e-08
Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Frame = +1
Query: 298 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 462
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 463 ANTVLSGGTTMYPGIATVCKRKSQLSPHRQ*RLRSLLLP---ERKYSVWIGGSIPRFLST 633
+N ++GG ++ G +LR P ERKY WIGGSI L T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 634 SNRCGFSK 657
+ SK
Sbjct: 413 FQQMWVSK 420
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/56 (35%), Positives = 39/56 (69%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 169
S +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 164 SCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.026
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 424 IMKCDVDIRKDLYANTVLSGGTTMYPGIATVCKRKSQL 537
+ KC +D+RK L+ N +L+GG + PG+ +++ Q+
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQV 235
>U23172-6|AAV58869.1| 484|Caenorhabditis elegans Hypothetical
protein F25B5.6c protein.
Length = 484
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 674 TRRTPVFENPHLLEVERKRGIDPPIHTEYFLSGRSNDLNLHCRWGESCDFLLHTVAI 504
++ P+F+ P + + R I P I + S S L L W E C F L V +
Sbjct: 235 SKHVPLFQTPPVSAYQFARDISPGIRGAHQFSNVSMALQLVRAWAEKCGFPLPGVPL 291
>U23172-5|AAC46527.1| 510|Caenorhabditis elegans Hypothetical
protein F25B5.6a protein.
Length = 510
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 674 TRRTPVFENPHLLEVERKRGIDPPIHTEYFLSGRSNDLNLHCRWGESCDFLLHTVAI 504
++ P+F+ P + + R I P I + S S L L W E C F L V +
Sbjct: 261 SKHVPLFQTPPVSAYQFARDISPGIRGAHQFSNVSMALQLVRAWAEKCGFPLPGVPL 317
>U23172-4|AAL02494.1| 521|Caenorhabditis elegans Hypothetical
protein F25B5.6b protein.
Length = 521
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 674 TRRTPVFENPHLLEVERKRGIDPPIHTEYFLSGRSNDLNLHCRWGESCDFLLHTVAI 504
++ P+F+ P + + R I P I + S S L L W E C F L V +
Sbjct: 272 SKHVPLFQTPPVSAYQFARDISPGIRGAHQFSNVSMALQLVRAWAEKCGFPLPGVPL 328
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/82 (32%), Positives = 35/82 (42%)
Frame = +1
Query: 34 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS* 213
R G R R+ RR RTPPR + R R R R+R V RR RS
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRR---RSE 137
Query: 214 HQGEAVLRRS*LRAEMATAASS 279
+ + R LRA ++ + SS
Sbjct: 138 SRSPSPKRDLQLRANISVSYSS 159
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 15 PVVPPVSCWT--PATVSPTPCPSTKDTHSPTPSC 110
P VPP T P TVS P PS PT SC
Sbjct: 370 PTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/92 (28%), Positives = 33/92 (35%)
Frame = +1
Query: 34 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS* 213
R G R R+ RR RTPPR + R R R R+R V RR
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRS 140
Query: 214 HQGEAVLRRS*LRAEMATAASSSSLEKSYELP 309
+ L+R R+ A S +S P
Sbjct: 141 PSPKRDLKREASRSRSPLPAKDRSRTRSGSPP 172
>AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical
protein H32C10.1 protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -3
Query: 488 VPPDNTVLAYKSLRMSTSHFMMELYVVSWMPQASIPKNEGWKRASGQRNLSFP-IVMT*P 312
VP DN ++++ LRM T ++ VV +I K + R ++ + +V P
Sbjct: 85 VPADNVLMSHSPLRMFTDLHDKQVLVVGQKNARAIAKGIIFFRVGFKKVTTIDHLVKWFP 144
Query: 311 SGSS*DFSRELLDAAVAISARSQER 237
DFSR+L+D +AR + R
Sbjct: 145 HLDCTDFSRKLVDPKETEAARKRFR 169
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 40 GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRAR 171
G+ RR R R+PPR + SR+R R P R R
Sbjct: 394 GMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRR 437
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 288 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 407
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 288 REVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYGSLRHPR 407
R++LR R HHYR+ + G +P L Y + R PR
Sbjct: 844 RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPR 885
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/96 (25%), Positives = 42/96 (43%)
Frame = +2
Query: 155 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFERKWPPLHPAAPSRSLTNFPTVRSSLSE 334
ILT R + FTTT V ++ DF + ++ + S T+ T ++SE
Sbjct: 2463 ILTPRTFLFTTTQPTSRVTPDTTRIT----DFYTRTT----SSGTTSETSTSTSSQTVSE 2514
Query: 335 TKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SATW 442
T + + +S P +W ++ P P ++TW
Sbjct: 2515 TDGTTSMFQTSEPSTWQTSNEPTSEPTTVPLETSTW 2550
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 15 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 104
P++PP PA V T P+T++T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 330 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 443
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 330 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 443
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 330 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 443
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 330 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 443
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 330 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 443
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 34 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRR 195
R G R R+ RR RTPPR + R R R R+R V RR
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRR 134
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 107
T PP S TP + T P T T SP+ S
Sbjct: 221 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 107
T PP S TP + T P T T SP+ S
Sbjct: 497 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDT 89
T P VPPV+ TP T + T +T T
Sbjct: 674 TAPTVPPVTTTTPTTTTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDT 89
T P VPPV+ TP T + T +T T
Sbjct: 730 TAPTVPPVTTTTPTTTTSTTTTTTTTT 756
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDT 89
T P VPPV+ TP T + T +T T
Sbjct: 553 TAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -2
Query: 453 LTDVHVALHDGVICGLVDAASFHTQERGLEESLWATESFVSDSDDLTVGKFVRLLEGAAG 274
+T +H A V+ G +DA + + R E + + D+LTV + +RL+ G
Sbjct: 497 ITGMHQATEGKVMIGGIDANANRAEAR---ELIGYCPQYNPIYDELTVWEHLRLVNALKG 553
Query: 273 CSGG 262
SGG
Sbjct: 554 RSGG 557
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 357 LWATESFVSDSDDLTVGKFVRLLEGAAGCSGG 262
L++T SFVS + T + + + G +GC GG
Sbjct: 7 LFSTASFVSPATTSTTTRCMEQVGGGSGCGGG 38
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 204 SFVTSRRSCATSLL----TSSGNGHRCIQQLPREVLRTSRR 314
S+ T+ S A +L +S G G RC + +P ++L T RR
Sbjct: 628 SWDTAENSTANDILHAMFSSPGTGPRCAKDVPNDLLDTMRR 668
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 15 PVVPPVSCWTPATVSPTPCPSTKDTHSP 98
P +PP + T T + PCP T++P
Sbjct: 134 PCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 266 PLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSN 370
P PAA RSL P R SL T +V+ R +N
Sbjct: 27 PASPAATRRSLPTSPISRRSLPSTPRTVSPRRLNN 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,156,686
Number of Sequences: 27780
Number of extensions: 387135
Number of successful extensions: 1771
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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