Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30080
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 187 7e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 185 3e-47
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 185 3e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 184 4e-47
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 183 1e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 174 5e-44
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 174 5e-44
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 171 4e-43
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 166 1e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 154 6e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 110 9e-25
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 86 2e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 75 3e-14
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 71 9e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 64 1e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 51 6e-07
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 50 1e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 50 1e-06
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 31 0.93
At5g43500.2 68418.m05318 expressed protein 30 1.6
At5g43500.1 68418.m05319 expressed protein 30 1.6
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.6
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 2.1
At3g28790.1 68416.m03593 expressed protein 29 2.1
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.1
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.1
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 29 2.1
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 29 2.8
At4g24175.1 68417.m03469 expressed protein 29 3.8
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 3.8
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 3.8
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.8
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.8
At5g01190.1 68418.m00024 laccase, putative / diphenol oxidase, p... 28 5.0
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 28 5.0
At2g36960.2 68415.m04533 myb family transcription factor contain... 28 6.6
At2g36960.1 68415.m04532 myb family transcription factor contain... 28 6.6
At2g33780.1 68415.m04143 VQ motif-containing protein contains PF... 28 6.6
At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase fam... 28 6.6
At1g47290.2 68414.m05236 3-beta hydroxysteroid dehydrogenase/iso... 28 6.6
At1g47290.1 68414.m05235 3-beta hydroxysteroid dehydrogenase/iso... 28 6.6
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 6.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 187 bits (455), Expect = 7e-48
Identities = 93/135 (68%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EM TA +SSS+EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKC
Sbjct: 228 EMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+PGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSK 657
I LST + +K
Sbjct: 347 ILASLSTFQQMWIAK 361
Score = 170 bits (413), Expect = 8e-43
Identities = 79/86 (91%), Positives = 85/86 (98%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TT+AEREIVRD+KEKL Y+ALD+E++
Sbjct: 203 TTSAEREIVRDVKEKLAYIALDYEQE 228
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 185 bits (450), Expect = 3e-47
Identities = 92/135 (68%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKC
Sbjct: 228 EMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+ GIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 347 ILASLSTFQQMWISK 361
Score = 164 bits (399), Expect = 4e-41
Identities = 77/86 (89%), Positives = 84/86 (97%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRDIKEKL +VA+D+E++
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQE 228
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 185 bits (450), Expect = 3e-47
Identities = 92/135 (68%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKC
Sbjct: 228 EMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+ GIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSK 657
I LST + SK
Sbjct: 347 ILASLSTFQQMWISK 361
Score = 164 bits (399), Expect = 4e-41
Identities = 77/86 (89%), Positives = 84/86 (97%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRDIKEKL +VA+D+E++
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQE 228
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 4e-47
Identities = 92/136 (67%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
E+ TA SSSS+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKC
Sbjct: 228 ELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGG+TM+PGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSKT 660
I LST + SK+
Sbjct: 347 ILASLSTFQQMWISKS 362
Score = 167 bits (405), Expect = 8e-42
Identities = 80/86 (93%), Positives = 83/86 (96%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRDIKEKL YVALD+E++
Sbjct: 203 TTTAEREIVRDIKEKLAYVALDYEQE 228
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 183 bits (445), Expect = 1e-46
Identities = 90/127 (70%), Positives = 103/127 (81%), Gaps = 1/127 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EM T+ +SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKC
Sbjct: 228 EMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+ GIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLST 633
I LST
Sbjct: 347 ILASLST 353
Score = 164 bits (399), Expect = 4e-41
Identities = 77/86 (89%), Positives = 84/86 (97%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY F
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRDIKEKL +VA+D+E++
Sbjct: 203 TTTAEREIVRDIKEKLSFVAVDYEQE 228
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 89/135 (65%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
E+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKC
Sbjct: 228 ELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+PGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSK 657
I LST + +K
Sbjct: 347 ILASLSTFQQMWIAK 361
Score = 172 bits (418), Expect = 2e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRDIKEKLCY+ALD+E++
Sbjct: 203 TTTAEREIVRDIKEKLCYIALDYEQE 228
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 89/135 (65%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
E+ TA +SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKC
Sbjct: 228 ELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+PGIA + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSK 657
I LST + +K
Sbjct: 347 ILASLSTFQQMWIAK 361
Score = 172 bits (418), Expect = 2e-43
Identities = 81/86 (94%), Positives = 85/86 (98%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRDIKEKLCY+ALD+E++
Sbjct: 203 TTTAEREIVRDIKEKLCYIALDYEQE 228
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 174 bits (423), Expect = 5e-44
Identities = 87/135 (64%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
E+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKC
Sbjct: 228 ELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+ GI + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSK 657
I LST + +K
Sbjct: 347 ILASLSTFQQMWIAK 361
Score = 169 bits (412), Expect = 1e-42
Identities = 80/86 (93%), Positives = 85/86 (98%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRD+KEKL Y+ALDFE++
Sbjct: 203 TTTAEREIVRDMKEKLSYIALDFEQE 228
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 174 bits (423), Expect = 5e-44
Identities = 87/135 (64%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
E+ T+ +SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKC
Sbjct: 228 ELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKC 287
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+ GI + K + L+P +++ + PERKYSVWIGGS
Sbjct: 288 DVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSM-KIKVVAPPERKYSVWIGGS 346
Query: 613 IPRFLSTSNRCGFSK 657
I LST + +K
Sbjct: 347 ILASLSTFQQMWIAK 361
Score = 168 bits (409), Expect = 3e-42
Identities = 79/86 (91%), Positives = 85/86 (98%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSF
Sbjct: 143 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TTTAEREIVRD+KEKL Y+ALD+E++
Sbjct: 203 TTTAEREIVRDMKEKLSYIALDYEQE 228
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 171 bits (416), Expect = 4e-43
Identities = 83/127 (65%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EM A +SS+++++YELPDGQVITIG ERFRCPE LFQ S +GME GIHETTYNSIMKC
Sbjct: 229 EMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKC 288
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIA-TVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
DVDIRKDLY N VLSGGTTM+PGIA + K + L+P +++ + PERKYSVW+GGS
Sbjct: 289 DVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSM-KIKVVAPPERKYSVWVGGS 347
Query: 613 IPRFLST 633
I LS+
Sbjct: 348 ILASLSS 354
Score = 162 bits (393), Expect = 2e-40
Identities = 73/86 (84%), Positives = 84/86 (97%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++
Sbjct: 144 SLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTY 203
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TT+AEREIVRDIKEKLCY+A+D+E++
Sbjct: 204 TTSAEREIVRDIKEKLCYIAVDYEQE 229
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 166 bits (404), Expect = 1e-41
Identities = 81/134 (60%), Positives = 95/134 (70%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EM A SS+++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKC
Sbjct: 180 EMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKC 239
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIATVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGSI 615
D DIRKDLY N VLSGGTTM+ GI ++ R++ + PERKYSVWIGGSI
Sbjct: 240 DDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSI 299
Query: 616 PRFLSTSNRCGFSK 657
LST + +K
Sbjct: 300 LASLSTYEQMWITK 313
Score = 133 bits (321), Expect = 1e-31
Identities = 65/86 (75%), Positives = 76/86 (88%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
SL+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY
Sbjct: 98 SLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY-- 155
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
T+AERE+VRDIKE+ Y+ALD+E++
Sbjct: 156 -TSAEREVVRDIKEQFGYIALDYEQE 180
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 154 bits (373), Expect = 6e-38
Identities = 68/85 (80%), Positives = 81/85 (95%)
Frame = +2
Query: 5 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 184
LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++T
Sbjct: 133 LYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYT 192
Query: 185 TTAEREIVRDIKEKLCYVALDFERK 259
T+AEREIVRDIKEKLCYVALD+E++
Sbjct: 193 TSAEREIVRDIKEKLCYVALDYEQE 217
Score = 128 bits (309), Expect = 3e-30
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
EM +++K+Y LPDGQ ITI ERF CPE LFQPS +G E+ GIHE T NSI+KC
Sbjct: 217 EMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKC 276
Query: 436 DVDIRKDLYANTVLSGGTTMYPGI-ATVCKRKSQLSPHRQ*RLRSLLLPERKYSVWIGGS 612
VD R+D+Y N +++GGTTM GI + K + L P +++ ++ PE + SVWIGGS
Sbjct: 277 PVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSM-KVKVVVPPESECSVWIGGS 335
Query: 613 IPRFLSTSNRCGFSK 657
I LST ++ +K
Sbjct: 336 ILASLSTFHQMWITK 350
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 110 bits (264), Expect = 9e-25
Identities = 45/86 (52%), Positives = 67/86 (77%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 181
+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+
Sbjct: 142 TLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAM 201
Query: 182 TTTAEREIVRDIKEKLCYVALDFERK 259
TA+ E VR+IKEKLCY++ D++R+
Sbjct: 202 NKTADFETVREIKEKLCYISYDYKRE 227
Score = 88.6 bits (210), Expect = 3e-18
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Frame = +1
Query: 250 RAEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIM 429
+ E ++ L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + + I
Sbjct: 225 KRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQ 284
Query: 430 KCDVDIRKDLYANTVLSGGTTMYPGIATVCKR-----------KSQLSPHRQ*RLRSLLL 576
+ D+D R LY + VLSGG+TMYPG+ + ++ K ++ RLR
Sbjct: 285 EMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDP 344
Query: 577 PERKYSVWIGGSI 615
P RK+ V++GG++
Sbjct: 345 PRRKHMVYLGGAV 357
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.2 bits (204), Expect = 2e-17
Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 15/137 (10%)
Frame = +1
Query: 295 SYELPDGQVITIGNERFRCPEALFQPSFL----GME--------ACGIHETTYNSIMKCD 438
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 439 VDIRKDLYANTVLSGGTTMYPGI-ATVCKRKSQLSPH--RQ*RLRSLLLPERKYSVWIGG 609
VDIR++LY++ +L+GGT+ + + K + SPH R L S ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 610 SIPRFLSTSNRCGFSKT 660
SI L + + FSK+
Sbjct: 410 SILASLGSFQQMWFSKS 426
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 8 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 172
+A+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Frame = +1
Query: 256 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 435
E+A + + + + LPDGQVI+IG ER+ EALFQPS LG+E GI E I
Sbjct: 209 EIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTV 268
Query: 436 DVDIRKDLYANTVLSGGTTMYPGIATVCKRKSQL--SPHRQ*RLR-SLLLPER--KYSVW 600
+ + L NTVL GGTT G + ++++ L S R ++ +PE YS W
Sbjct: 269 SSENHRQLLENTVLCGGTTSMTGFESRFQKEANLCSSAIRPTLVKPPEYMPENLGMYSAW 328
Query: 601 IGGSI 615
+GG+I
Sbjct: 329 VGGAI 333
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 70.5 bits (165), Expect = 9e-13
Identities = 30/98 (30%), Positives = 56/98 (57%)
Frame = +2
Query: 26 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 205
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDV 232
Query: 206 VRDIKEKLCYVALDFERKWPPLHPAAPSRSLTNFPTVR 319
R +KE CY D +++ H P++ + + V+
Sbjct: 233 ARKVKEMYCYTCSDIVKEFNK-HDKEPAKYIKQWKGVK 269
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 328 IGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 498
+G ERF PE F P + + I +D R+ LY N VLSGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMF 337
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +2
Query: 32 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
+V+D G +H VP+ + L HAI R+DL G+ T+YL ++++ R S E +V
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVD 212
Query: 212 DIKEKLCYVALDFER 256
D KEKLC+V+LD R
Sbjct: 213 DAKEKLCFVSLDLLR 227
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +1
Query: 322 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 501
I + NERF PE LFQP+ LGM G+ E +I C ++ LY + +L+GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = +1
Query: 322 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTT 492
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +++GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 493 MYPGI 507
+ PG+
Sbjct: 649 LLPGM 653
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +2
Query: 5 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 184
L+ + GIVL G +H++P +G + R ++ G +TDYL ++L+ + +
Sbjct: 163 LHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHS 222
Query: 185 TTAEREIVRDIKEKLCYVALDF 250
+ E D+K + CY+A D+
Sbjct: 223 SRFTWEKAEDLKLEHCYIAPDY 244
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYS 178
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 179 FTTTAEREIVRDIKEKLCYVALDFE 253
F + VR +KEKLCYVALD++
Sbjct: 303 FQSLYT---VRTLKEKLCYVALDYK 324
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYS 178
+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E S
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNIS 302
Query: 179 FTTTAEREIVRDIKEKLCYVALDFE 253
F + VR +KEKLCYVALD++
Sbjct: 303 FQSLYT---VRTLKEKLCYVALDYK 324
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 268 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCD-VD 444
A S + S E+ T+ ERF+ E LFQP GM A +H+ + CD
Sbjct: 325 AELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAG 384
Query: 445 IRKD--LYANTVLSGGTTMYPGIATVCKRKSQ 534
+ D + VL+GG+ PG++ +R+ Q
Sbjct: 385 LTGDDSWFKTVVLTGGSACLPGLSERLERELQ 416
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 107
T PV PP TP+ SPTP P + +PTPS
Sbjct: 94 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 107
T PV PP TP+ SPTP P + +PTPS
Sbjct: 112 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 107
T PV PP TP+ SPTP P + +PTPS
Sbjct: 130 TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 104
T PV PP TP+ SPTP T SP P
Sbjct: 148 TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 388 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPG-IATVCKRKSQLSPHRQ*RL 561
E G+ E +SI+ +D+R+ L+++ L GG + G +A V +R P +
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 562 RSLLLPER---KYSVWIGGSI 615
+LP R ++ W GG+I
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAI 538
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 157
+++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 277 AVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 388 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPG-IATVCKRKSQLSPHRQ*RL 561
E G+ E +SI+ +D+R+ L+++ L GG + G +A V +R P +
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 562 RSLLLPER---KYSVWIGGSI 615
+LP R ++ W GG+I
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAI 550
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 2 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 157
+++ +G TT +++ G S V + +G +LP+ L G D+ L+ I
Sbjct: 289 AVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 18 VVPPVSCWTPATVSPTPCPSTKDT-HSPTPSC 110
+ PP+SC TP PCP + HS T C
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 15 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 104
P PP S TP SP P P + SPTP
Sbjct: 230 PGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 24 PPVSCWTPATVSP-TPCPSTKDTHSPTPS 107
P S TP+T +P TP PST +PTPS
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 57 SPTPCPSTKDTHSPTPS 107
SPTP PST +PTPS
Sbjct: 278 SPTPTPSTPTPSTPTPS 294
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 24 PPVSCWTPATVSPTPCPSTKDTHSPTP 104
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 24 PPVSCWTPATVSPTPCPSTKDTHSPTP 104
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 116
T P P PA V P P P + +P P +W
Sbjct: 92 TAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 266 PLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLAASTRPHITPS*SAT 439
PLH ++P +F + ++++ AQ +S+PR W+ + A S+ T S S +
Sbjct: 139 PLHSSSPF----SFGSAPAAITSVSSGPAQSPASSPRLWIDRFATSSSASATSSSSTS 192
>At4g24175.1 68417.m03469 expressed protein
Length = 306
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +3
Query: 279 QLPREVLRTSRRSGHHYRK------RKIPLPRGSLPTLVL 380
QL R + + S + HH+R +K+P P S+PTL+L
Sbjct: 3 QLIRPIRQLSPQCNHHFRNLRYLFSKKLPNPPSSIPTLLL 42
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 113
T PVV P + P PTP P +PTP +
Sbjct: 171 TPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 113
T PVV P + P PTP P +PTP V
Sbjct: 191 TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 113
T PV+ P + P PTP P +PTP V
Sbjct: 201 TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 113
T PV+ P + P PTP P +PTP +
Sbjct: 181 TPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI 215
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 9 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 104
T PV+ P + P PTP P +PTP
Sbjct: 211 TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 21 VPPVSCWTPATVSPTPCPSTKDTHSPTPS 107
+PPV+ TP+ ++ P P + T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 24 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 107
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 24 PPVSCWTPATVSPTPCPSTK-DTHSPTPS 107
PP +P P P P+TK D+ SP+PS
Sbjct: 112 PPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
>At5g01190.1 68418.m00024 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 553
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +3
Query: 483 WYHHVPWNRDRMQKEITALAPSTMKIKIIAPSREEVLRMDRW 608
W+ HV W R + I L + P REEV+ + W
Sbjct: 124 WHAHVLWLRATVHGAIVILPKLGLPYPFPKPHREEVIILGEW 165
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 15 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 104
P PP SC TP+ P+P P K + P+P
Sbjct: 53 PSPPPPSC-TPSPPPPSPPPPKKSSCPPSP 81
>At2g36960.2 68415.m04533 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 741
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 566 HCSFQRGSTPYGSVDRFLASSLLPTDVDSRKQEYDE 673
H G TP G D + SL P D+D R +Y +
Sbjct: 666 HTMDSPGKTPCGLADVYWPDSLGPLDLDIRSSKYTD 701
>At2g36960.1 68415.m04532 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 743
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 566 HCSFQRGSTPYGSVDRFLASSLLPTDVDSRKQEYDE 673
H G TP G D + SL P D+D R +Y +
Sbjct: 668 HTMDSPGKTPCGLADVYWPDSLGPLDLDIRSSKYTD 703
>At2g33780.1 68415.m04143 VQ motif-containing protein contains
PF05678: VQ motif
Length = 204
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 257 KWPPLHPAAPSRSLTNFPTVRS-SLSETKDSVAQRLSSNP 373
++PP H P +++TN S LSE ++S+ L+ NP
Sbjct: 67 RFPPFHSIPPIKAVTNKKQSSSFRLSERRNSMKHYLNINP 106
>At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 535
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 249 SSGNGHRCIQQLPREVLRTSRRSGH-HYRKRKIPLP 353
SS GH+C+ + PR L S RSG H PLP
Sbjct: 249 SSARGHQCVYE-PRNPLDMSHRSGPVHLMTGGSPLP 283
>At1g47290.2 68414.m05236 3-beta hydroxysteroid
dehydrogenase/isomerase family protein contains Pfam
profile PF01073 3-beta hydroxysteroid
dehydrogenase/isomerase domain; similar to
NAD(P)-dependent steroid dehydrogenase from Homo sapiens
[SP|Q15738], Mus musculus [SP|Q9R1J0]
Length = 439
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 537 LAPSTMKIKIIAPSREEVLRMDRWIDSS 620
L P MK+ ++ PSR +L +R DSS
Sbjct: 306 LGPYGMKVPVLTPSRVRLLSCNRTFDSS 333
>At1g47290.1 68414.m05235 3-beta hydroxysteroid
dehydrogenase/isomerase family protein contains Pfam
profile PF01073 3-beta hydroxysteroid
dehydrogenase/isomerase domain; similar to
NAD(P)-dependent steroid dehydrogenase from Homo sapiens
[SP|Q15738], Mus musculus [SP|Q9R1J0]
Length = 382
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 537 LAPSTMKIKIIAPSREEVLRMDRWIDSS 620
L P MK+ ++ PSR +L +R DSS
Sbjct: 306 LGPYGMKVPVLTPSRVRLLSCNRTFDSS 333
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 25 HRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 117
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,742,043
Number of Sequences: 28952
Number of extensions: 386180
Number of successful extensions: 1717
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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