Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30076
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0128 - 8620958-8621248,8622986-8623576                           28   6.0  
07_01_0129 - 959600-959625,960100-961428,961585-961657,962185-96...    28   7.9  
03_06_0191 - 32228642-32228949,32229028-32230567                       28   7.9  

>11_02_0128 - 8620958-8621248,8622986-8623576
          Length = 293

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 506 HLKFILSSMELFYRNLWLRCLL-VTNFKN*IKFIQQLLSDS 625
           H +FIL +  L YR  WL+  L + N +   +FI Q  SD+
Sbjct: 173 HARFILGAASLRYRQPWLQNRLHMQNVEKIAEFIGQPFSDA 213


>07_01_0129 -
           959600-959625,960100-961428,961585-961657,962185-962226
          Length = 489

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 187 NLYYILLPGQFNLIYWYIRLYTIKKIHKI 101
           ++Y +LL   FN  YW + L  I+K  K+
Sbjct: 389 SIYTLLLRANFNAQYWSMALAIIRKFRKL 417


>03_06_0191 - 32228642-32228949,32229028-32230567
          Length = 615

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +1

Query: 127 ITLYTNILN*IVQVIKYNIGFKIVQRNCMR*TSHCKTIHTCYIISKC 267
           +T YT+++N + Q  KY    +I  +  ++ T    ++ T +I++ C
Sbjct: 465 VTTYTSVINMLCQEKKYEQAVEIFTKCVVQDTEVASSVLTVFILALC 511


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,381,154
Number of Sequences: 37544
Number of extensions: 244266
Number of successful extensions: 348
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)