Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30076
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71258-5|CAA95784.2|  452|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z92782-1|CAB07184.1|  349|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical ...    28   5.3  
AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical...    28   7.0  
AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical ...    28   7.0  

>Z71258-5|CAA95784.2|  452|Caenorhabditis elegans Hypothetical
           protein C01H6.6 protein.
          Length = 452

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 418 MFKKNILTLTSVSLLHFFIIHNLFIGAPISFEIHIIFNGIVLSK 549
           +F KN L + S   L +F+I  + I +PIS+ + ++ N I+L K
Sbjct: 210 IFTKNALAIAS--RLQYFVIFTMCITSPISYPLAMLLN-IILGK 250


>Z92782-1|CAB07184.1|  349|Caenorhabditis elegans Hypothetical
           protein F14F8.1 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = +1

Query: 358 FSHNCDD*QSLHISFVNSFGMFKKNILTLTSVSLLHFFIIHNLFIGAPISFEIHIIFNGI 537
           F+HN  + Q L+ S +N + M  K +L     S   F+++   F+     +    IF+G+
Sbjct: 64  FAHNYKN-QFLYFS-LNEW-MESKIVLRFLLASWAGFYVVIVWFVAIQFVYRYLCIFDGV 120

Query: 538 VLSKFMAK 561
            L KF  K
Sbjct: 121 TLKKFDGK 128


>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 69  ISNMPIHYLATILCIFLIVYNLIYQYIKLNCPGNK 173
           +SN  + Y+  I     +++  IY Y KL+C GN+
Sbjct: 308 LSNRVLTYIGDISYALYLIHWPIYAYWKLSCDGNQ 342


>AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical
           protein F37C4.3 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 69  ISNMPIHYLATILCIFLIVYNLIYQYIKLNCPGNKI 176
           +SN  + Y+  I     +++  IY Y KL C GN+I
Sbjct: 307 LSNRILAYIGDISYSLYLIHWPIYAYWKLTCNGNQI 342


>AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical
           protein F37C4.1 protein.
          Length = 612

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 69  ISNMPIHYLATILCIFLIVYNLIYQYIKLNCPGNKI 176
           +SN  + Y+  I     +++  IY Y KL C GN+I
Sbjct: 234 LSNRILIYIGDISFSLYLIHWPIYAYWKLTCNGNQI 269


>AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical
           protein Y58A7A.3 protein.
          Length = 883

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 220 TSHCKTIHTCYIISKCINFRSGCK*SHN 303
           T HCKT++ C + +K +N   GC+ S N
Sbjct: 682 TCHCKTVYYCLLPTKRVNC-PGCRESVN 708


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,920,763
Number of Sequences: 27780
Number of extensions: 267964
Number of successful extensions: 599
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)