Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30075
(607 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 33 0.13
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 33 0.18
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 32 0.41
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 31 0.71
07_03_0544 + 19309026-19310105 31 0.71
01_05_0551 + 23169751-23170491 31 0.94
06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398 30 1.2
05_07_0162 + 28090579-28091343 29 2.2
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 29 2.9
03_02_0457 + 8638318-8638336,8640394-8640497,8640613-8640778,864... 29 3.8
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 29 3.8
11_03_0041 + 9165575-9165800,9166286-9166362 28 5.0
08_01_0229 + 1834102-1834358,1834442-1834901 28 5.0
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 28 5.0
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 5.0
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773... 28 6.6
08_02_0543 + 18391122-18391471,18391870-18392005,18393529-18393597 28 6.6
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 28 6.6
04_04_0623 + 26669284-26669421,26670906-26671564,26671948-266721... 28 6.6
03_05_0755 - 27462388-27463140 28 6.6
02_01_0384 - 2781362-2782299,2782320-2782428 28 6.6
01_05_0799 + 25334460-25334994,25335060-25335236,25335325-253354... 28 6.6
01_05_0503 - 22779025-22779397,22779602-22779627 28 6.6
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 27 8.7
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 27 8.7
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 27 8.7
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +2
Query: 176 SDCMDKSRLRQSTVHSNEIGERQRSQPPDMRAP--GELVRAR-VREGVPPPLCAGRCVAP 346
+D + + Q T+ ++E + +PP R P G+ V A V V L +GR V P
Sbjct: 700 NDYTSQHEIAQQTLSTSERQPQPEKKPPRTRPPLPGKAVAALCVASFVVGLLLSGRVVVP 759
Query: 347 PAGPVCAFDAAGTRRTFATLCELEAVSCRES 439
P + A+ + +F+T CE + ES
Sbjct: 760 LLPPGSSSPASNYKTSFSTGCENKRAKLGES 790
>07_03_1523 +
27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = -2
Query: 468 TPKLVTA*YVLSRHETASSSHRVANVL-RVPAASKAHTGPAGGATHRPAHSGGGTPSRTL 292
TP L A + H AS S VA R AA G G + HRP P L
Sbjct: 120 TPNLADARGLQRYHRQASQSAAVATTCSRCVAADATGCGSLGASRHRPWRPRAAAPRSAL 179
Query: 291 ARTSSPG 271
AR++ G
Sbjct: 180 ARSTFRG 186
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 381 PAASKAHTGPAGGATHRPAHSGGGT--PSRTLARTSSPGALISGG 253
P AS H+G GG + GGG+ P LA + +P A SGG
Sbjct: 64 PTASTKHSGSGGGGGAASNNGGGGSAPPPGNLAGSGTPPAKGSGG 108
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 290 ARVREGVPP--PLCAGRCVAPPAGPVCAFDAAGTRRTFATL-CELEAV--SCRESTYYAV 454
AR+R +PP P CA R PP P A D A + T AT+ + AV CR + AV
Sbjct: 140 ARMRPILPPNIPRCASRRQPPPQCPAAAADDAPSTSTAATVKRQRNAVLTRCRSDSRLAV 199
Query: 455 TSLG 466
G
Sbjct: 200 RGGG 203
>07_03_0544 + 19309026-19310105
Length = 359
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 241 SKKSATGYESPG*AGPSEGPRGGATAAVCRAVRGPAG 351
+K+S +G +PG GP GGA AAV A G AG
Sbjct: 101 NKRSRSGGAAPGGGVGRGGPGGGAAAAVSSAGGGAAG 137
>01_05_0551 + 23169751-23170491
Length = 246
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 414 SSHRVANVLRVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 277
+S+R+ + R P H G GG HR G+ R A T S
Sbjct: 42 TSNRLLSTCRFPRTPSLHGGGGGGGDHRTTDDDDGSNGRDQAATLS 87
>06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398
Length = 187
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 435 SRHETASSSHRVANVLRVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 277
S TA+++ A AAS A TG A +P SGG T +L SS
Sbjct: 121 SSSATAAAAAAGAGTAGSTAASSASTGNAASTAAKPTASGGATHRLSLISASS 173
>05_07_0162 + 28090579-28091343
Length = 254
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 314 PPLCAGRCVAPPAGPV 361
PPL GRCV PP PV
Sbjct: 52 PPLAGGRCVGPPLYPV 67
>01_06_1164 - 35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/72 (29%), Positives = 27/72 (37%)
Frame = -2
Query: 468 TPKLVTA*YVLSRHETASSSHRVANVLRVPAASKAHTGPAGGATHRPAHSGGGTPSRTLA 289
TP++V+A V+ R E S V P + P RP +G G P
Sbjct: 1126 TPQVVSAALVVERDEDDPRSAHPHPVSTRPGREQGGEAPEPNGGPRPPTAGAGPPPACPK 1185
Query: 288 RTSSPGALISGG 253
S A SGG
Sbjct: 1186 AQSRLAAAASGG 1197
>03_02_0457 +
8638318-8638336,8640394-8640497,8640613-8640778,
8641403-8641467
Length = 117
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 217 SFQRDWGASKKSATGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTSVR 366
S+++ +G+ KK G PG GP GP GG +RGP + +R
Sbjct: 47 SYRKGYGSGKKWDGG---PGGGGPGGGPYGGGRGG-GGGLRGPRTLSDIR 92
>02_04_0028 +
19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 205 PVYRSFQRDWGASKKSATGYESPG*AGPSEGPRGGATAA 321
P++R + WG+S +AT +PG A + +GG +AA
Sbjct: 54 PLWRPPRWPWGSSSSAATA-AAPGGASTAAAAQGGGSAA 91
>11_03_0041 + 9165575-9165800,9166286-9166362
Length = 100
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -2
Query: 426 ETASSSHRVANVLRVPAASKAHTGPAGGATHRPAHSGGG 310
E + HR A+V R A G GG+ H A G G
Sbjct: 33 EDVAKRHRAASVARARAHCGGGDGKDGGSGHHGARGGSG 71
>08_01_0229 + 1834102-1834358,1834442-1834901
Length = 238
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 243 KEVSHRI*EPRVSWSERGSARGCHRRCVQGGAWPRRQD 356
K V++ I SE +RG HR C++G A R+D
Sbjct: 58 KGVAYEIGAAASGGSETAGSRGSHRGCLRGRAVAERRD 95
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 350 PAGPRTAL-HTAAVAPPRGPSLGPAHPGLSYPVADFFDAPQSRWNE 216
P G R + HTAA A GP+LG P P F A ++E
Sbjct: 60 PLGHRARMGHTAAAAAAAGPALGLTKPNAVEPPQVSFAAKDVEFSE 105
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 381 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA 268
PA S + P G AT+R SGGG S T + + G+
Sbjct: 92 PANSTSPEPPGGAATNRRGSSGGGGFSATGGQAGTNGS 129
>08_02_1237 +
25475219-25475916,25476127-25476320,25476407-25477302,
25477416-25477490,25477582-25477689,25477780-25477897,
25478007-25478142,25478228-25478372,25478460-25479080,
25479166-25479597
Length = 1140
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 381 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGG 253
PAA+ + P+ A+ PA PS+ + R+ SPG+ GG
Sbjct: 127 PAATTVSSSPSPPASSAPAQEPVVRPSKRV-RSGSPGSASGGG 168
>08_02_0543 + 18391122-18391471,18391870-18392005,18393529-18393597
Length = 184
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -3
Query: 368 RRTLVLPAGPRTALHTAAVAPPRGP-SLGPAHPGLSYPVA---DFFDAPQSRW 222
RR L +P + LH A + PP+ S P P PVA D F AP RW
Sbjct: 13 RRHLRVPLA--SLLHPALLPPPQSTESSCPDDPSTPGPVARRGDLFAAPLRRW 63
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 235 GASKKSAT-GYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTSVR 366
G+ S T G+++PG A PS P GGA+ PA T R
Sbjct: 56 GSKSGSTTPGHQTPGVAWPSPYPSGGASPLPAGVSPSPARSTPRR 100
>04_04_0623 +
26669284-26669421,26670906-26671564,26671948-26672140,
26672220-26672284,26672399-26672609,26673284-26673515,
26674463-26674521,26674651-26674680,26674761-26674850
Length = 558
Score = 27.9 bits (59), Expect = 6.6
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Frame = +2
Query: 245 RSQPPDMRAPGELVRARVREGVPP----PLCAGRCVAPPAGPVCAFDAAGTR-----RTF 397
++ PP A V A R GVP P + C PP P+ G R +T
Sbjct: 48 QASPPATAAIPAAVAATTRAGVPAAPPHPTYSISCSTPPRPPLNLSGGGGARTPQTSQTL 107
Query: 398 ATLCELEAVSCRESTYYAVTSLGV 469
A + SCR S A S V
Sbjct: 108 ALALSSSSSSCRSSPDPATASASV 131
>03_05_0755 - 27462388-27463140
Length = 250
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +3
Query: 294 GSARGCH--RRCVQGGAW--PRRQDQCAPLMQPER 386
G +R C RR +Q W RR+DQCA + QP R
Sbjct: 169 GHSRQCFDDRRRLQSCCWCCHRRRDQCAAVPQPAR 203
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 235 GASKKSATGYESPG*AGPSEGPRGGATAAVCRAVRGPAG 351
GA ++S++ SP AG EGPRGG R RGP G
Sbjct: 235 GAPRRSSSA-ASPSCAGV-EGPRGGEVDDGRRPRRGPLG 271
>01_05_0799 + 25334460-25334994,25335060-25335236,25335325-25335447,
25335559-25335624,25335717-25336685,25336791-25336912,
25337156-25337549,25337888-25338009,25338253-25338646,
25338983-25339104,25339348-25339830,25340291-25340960,
25341713-25342224,25342484-25342540
Length = 1581
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 545 WAYKYKFHKNGINLNHIFLISKLFSKLPNL 456
+A+ +F K G+ HI LI K SKL NL
Sbjct: 1117 YAHVTEFQKRGLPHEHILLIMKPGSKLTNL 1146
>01_05_0503 - 22779025-22779397,22779602-22779627
Length = 132
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 171 LYKQKPFRLTFPTESKYRHHRTAYEIVLIRNTNVARLSN 55
LYK + ++L + E+K+R+ TA IR + LSN
Sbjct: 42 LYKSQEYKLHYTLETKHRNRNTANSKDGIRMAAMENLSN 80
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 227 EIGERQRS--QPPDMRAPGELVRARVREGVP 313
E+GE ++ + PDM APGE + + R+G+P
Sbjct: 100 EMGEEIKNGEEGPDMAAPGEEEQEQGRKGIP 130
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = -3
Query: 341 PRTALHTAAVAPPR----GPSLGPAHPGLS 264
P ALHT APP GP+ AHP L+
Sbjct: 130 PSPALHTRTAAPPSHCRPGPAPSGAHPSLA 159
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 357 GPAGGATHRPAHSGGGTPSRTLARTSSPGALISGG 253
GP+GGA P+H GG PS +SP S G
Sbjct: 94 GPSGGALPSPSH-GGAAPSHGGGYGASPPVTPSPG 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,206,346
Number of Sequences: 37544
Number of extensions: 441188
Number of successful extensions: 1907
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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