Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30075
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 31 0.84
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 31 0.84
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 31 0.84
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 31 0.84
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 31 0.84
AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical... 31 0.84
U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical pr... 29 2.6
U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of ... 28 4.5
AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium cha... 28 4.5
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 28 4.5
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 28 4.5
Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical ... 27 7.9
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 27 7.9
AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical ... 27 7.9
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 27 7.9
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 369 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 277
++HT +GGAT S G+P+ +LART S
Sbjct: 398 QSHTASSGGATTITLGSPNGSPTSSLARTQS 428
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 369 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 277
++HT +GGAT S G+P+ +LART S
Sbjct: 411 QSHTASSGGATTITLGSPNGSPTSSLARTQS 441
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 369 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 277
++HT +GGAT S G+P+ +LART S
Sbjct: 410 QSHTASSGGATTITLGSPNGSPTSSLARTQS 440
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 369 KAHTGPAGGATHRPAHSGGGTPSRTLARTSS 277
++HT +GGAT S G+P+ +LART S
Sbjct: 413 QSHTASSGGATTITLGSPNGSPTSSLARTQS 443
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 311 PPPLCAGRCVAPPAGPVCAFDAAGTR-RTFATLCELEAVSCRESTYYAVTSLGVC 472
P +C C G V G+ T++ LCEL+ +C+ S+G+C
Sbjct: 798 PDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACKHQIDVVPVSMGIC 852
>AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical
protein C18G1.1 protein.
Length = 136
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 192 LSIQSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL 88
+S+ LK Y +KP R TE++ +H+RT + I+L
Sbjct: 45 ISLFPLKDYSRKPGRGPQRTEAEMKHYRTVFYIIL 79
>U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical
protein C50F2.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 129 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 28
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical
protein C43E11.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 129 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 28
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of
potassium channelsprotein 16 protein.
Length = 555
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 341 PRTALHTAAVAPPRGPSLGPAHPGLSYPVADFFDAPQSR 225
PR+ +H+ P P + P P +P DAP R
Sbjct: 357 PRSIIHSPCSTRPSNPPMSPPSPREDHPFIFKMDAPAPR 395
>AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium
channel subunit n2P16 protein.
Length = 555
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 341 PRTALHTAAVAPPRGPSLGPAHPGLSYPVADFFDAPQSR 225
PR+ +H+ P P + P P +P DAP R
Sbjct: 357 PRSIIHSPCSTRPSNPPMSPPSPREDHPFIFKMDAPAPR 395
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 250 SATGYESPG*AGPSEGPRGGATAAVCRAVRGPAG 351
S++ SPG GP GP G A+ C ++GP G
Sbjct: 253 SSSTASSPGPPGPP-GPPGVCHASQCTGIQGPPG 285
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 343 PAGRTSVRL*CSRNAKDIRYSM*TRGCFVSRKHVLRR 453
P + SV C+ A+D+RY++ TR V+R+HVL R
Sbjct: 792 PGIKASVIETCAA-ARDVRYNVHTRNRAVNREHVLIR 827
>Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5b protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 227 EIGERQRSQPPDMRAPGELVRARVREGVPP 316
E+ +R+RSQ P R P VR +R PP
Sbjct: 48 ELLDRRRSQSPPPREPSPDVRRAIRRTPPP 77
>Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5a protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 227 EIGERQRSQPPDMRAPGELVRARVREGVPP 316
E+ +R+RSQ P R P VR +R PP
Sbjct: 48 ELLDRRRSQSPPPREPSPDVRRAIRRTPPP 77
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 342 PRRQDQCAPLMQPEREGHSLLYVNSRLFRVAKARITPS 455
PRR ++ AP+ P+ EGHSL+ V L K + P+
Sbjct: 1348 PRRAEK-APVPLPDYEGHSLIKVRKPLSPTDKDVLEPN 1384
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 342 PRRQDQCAPLMQPEREGHSLLYVNSRLFRVAKARITPS 455
PRR ++ AP+ P+ EGHSL+ V L K + P+
Sbjct: 1348 PRRAEK-APVPLPDYEGHSLIKVRKPLSPTDKDVLEPN 1384
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Frame = -2
Query: 426 ETASSSHRVANVLRVPAASKAHTGPA---GGATHRPAHSGGGTPSRTLARTSSPGALISG 256
+TA+ H +S H PA G + A GGGT T +S A SG
Sbjct: 62 KTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 121
Query: 255 G 253
G
Sbjct: 122 G 122
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 357 GPAGGATHRPAHSGGGT 307
GP G HRP HS G T
Sbjct: 72 GPRGARDHRPRHSAGNT 88
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Frame = -2
Query: 426 ETASSSHRVANVLRVPAASKAHTGPA---GGATHRPAHSGGGTPSRTLARTSSPGALISG 256
+TA+ H +S H PA G + A GGGT T +S A SG
Sbjct: 62 KTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 121
Query: 255 G 253
G
Sbjct: 122 G 122
>AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical
protein Y116A8B.1 protein.
Length = 207
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 357 GPAGGATHRPAHSGGGT 307
GP G HRP HS G T
Sbjct: 70 GPRGARDHRPRHSAGNT 86
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.5 bits (58), Expect = 7.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = -3
Query: 524 HKNGINLNHIFLISKLFSKLPNL*RRNTCFRDTKQPRVHIE*RMSFAFRLHQRRTLVLPA 345
++ INLN+ ++++++F LP+ R C + V F + V+P
Sbjct: 397 YQRQINLNY-YILTQIFRNLPS---RIQCSEAVRLGLVRSTEIQGFC------TSRVIPG 446
Query: 344 GPRTALHTAAVAPPRGPSL-----GPAHPGLSYPV 255
GP TA P GP + GP HP +YP+
Sbjct: 447 GPVNQPSTAFPPNPNGPEVPVTTGGPIHP--AYPI 479
>AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical
protein C18E3.2 protein.
Length = 449
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 257 PDMRAPGELVRARVREGVPPPLCAGRCVAPPAGPV 361
P MR PG G PP + R VAPPA P+
Sbjct: 23 PQMRRPGGFA------GQPPQMHGPRMVAPPAAPL 51
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = -3
Query: 524 HKNGINLNHIFLISKLFSKLPNL*RRNTCFRDTKQPRVHIE*RMSFAFRLHQRRTLVLPA 345
++ INLN+ ++++++F LP+ R C + V F + V+P
Sbjct: 315 YQRQINLNY-YILTQIFRNLPS---RIQCSEAVRLGLVRSTEIQGFC------TSRVVPG 364
Query: 344 GPRTALHTAAVAPPRGPSLGPAHPG 270
GP TA+ P GP + P +PG
Sbjct: 365 GPVRPPTTASTPKPNGPEV-PVNPG 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,554
Number of Sequences: 27780
Number of extensions: 344328
Number of successful extensions: 1204
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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