Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30075
(607 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.44
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.58
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 24 1.0
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 21 7.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.4
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.4 bits (53), Expect = 0.44
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -2
Query: 348 GGATHRPAHSGGGTPS---RTLARTSSPGA 268
G H P H+ G PS T+A TS+PG+
Sbjct: 209 GYGRHLPGHAQMGRPSYTTATMATTSTPGS 238
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.0 bits (52), Expect = 0.58
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 129 TQLEMLSGKVFVCIVLVTVWIKADCA-SLPFIPTR 230
+QL + SG VFV I++ VW+ D A ++ PTR
Sbjct: 767 SQLIICSGLVFVQILINGVWMIIDPAKAMHHYPTR 801
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 24.2 bits (50), Expect = 1.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -2
Query: 426 ETASSSHRVANVLRVPAASKAHTGPAGGATH--RPA-HSGGGTPSRTLARTSSPGALI 262
ET SS + P++S + + PA GA +P+ +GG T + L R S +L+
Sbjct: 506 ETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQELKRLKSTVSLL 563
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 153 KVFVCIVLVTVWIKADCASLP 215
K FV ++ + A CAS+P
Sbjct: 2 KFFVLFAILIAIVHASCASVP 22
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -3
Query: 308 PPRGPSLGPAH 276
PP+ P GP H
Sbjct: 169 PPQNPRFGPTH 179
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -3
Query: 308 PPRGPSLGPAH 276
PP+ P GP H
Sbjct: 169 PPQNPRFGPTH 179
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 532 ISSIKMALILIIFS*FLNYSANSQ 461
ISSI + I +IF+ F ++S + Q
Sbjct: 174 ISSIPLDYIFLIFNQFQDFSESFQ 197
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 532 ISSIKMALILIIFS*FLNYSANSQ 461
ISSI + I +IF+ F ++S + Q
Sbjct: 174 ISSIPLDYIFLIFNQFQDFSESFQ 197
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +3
Query: 126 WTQLEMLSGKVFVCIVLVTVWIKAD---CASLP 215
W Q+ ++S + +C+ +T + C S P
Sbjct: 421 WKQVALVSDRALLCVFFLTTIVSTTVILCGSPP 453
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -3
Query: 308 PPRGPSLGPAH 276
PP+ P GP H
Sbjct: 407 PPQNPRFGPTH 417
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 532 ISSIKMALILIIFS*FLNYSANSQ 461
ISSI + I +IF+ F ++S + Q
Sbjct: 174 ISSIPLDYIFLIFNQFQDFSESFQ 197
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,926
Number of Sequences: 438
Number of extensions: 4400
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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