Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30074
(726 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 5.8
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.8
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 7.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.7
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 180 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 85
K PG S GD + + V H T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -1
Query: 174 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 85
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -1
Query: 174 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 85
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 59
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +2
Query: 374 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 493
H + P Y + +R+A+ P TH + +Y D
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYAD 103
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,282
Number of Sequences: 336
Number of extensions: 4121
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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