Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30074
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 134 7e-32
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 131 6e-31
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 130 1e-30
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.93
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 2.2
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 3.8
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 5.0
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 5.0
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.0
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 28 6.6
03_05_0206 + 21975077-21975673,21975733-21975831 28 6.6
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 6.6
07_03_1029 + 23379890-23380139,23380506-23381131 28 8.7
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 8.7
04_04_1303 - 32487174-32487871,32488583-32489123 28 8.7
03_05_0208 + 22006032-22006673,22006695-22007078 28 8.7
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 134 bits (324), Expect = 7e-32
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +2
Query: 254 VDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVAT 433
VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+AK+KLCKV+ V
Sbjct: 88 VDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQF 147
Query: 434 GPKNVPYLVTHDGRTIRYPDPLIK 505
G K +P+L T+DGRTIRYPDPLIK
Sbjct: 148 GQKGIPFLNTNDGRTIRYPDPLIK 171
Score = 113 bits (273), Expect = 1e-25
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +3
Query: 45 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 224
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 225 LKIVKQR 245
+ I+ QR
Sbjct: 78 ISILMQR 84
Score = 111 bits (268), Expect = 4e-25
Identities = 46/80 (57%), Positives = 64/80 (80%)
Frame = +1
Query: 487 PRPTYQSHDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVH 666
P P +++D+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H
Sbjct: 166 PDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIH 225
Query: 667 IKDSTGHTFATRLNNVFIIG 726
++D+ GH FATR+ NVF IG
Sbjct: 226 VEDALGHQFATRMGNVFTIG 245
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 131 bits (316), Expect = 6e-31
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = +2
Query: 254 VDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVAT 433
VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V
Sbjct: 72 VDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQF 131
Query: 434 GPKNVPYLVTHDGRTIRYPDPLIK 505
G K +PYL T+DGRTIRYPDPLIK
Sbjct: 132 GQKGIPYLNTYDGRTIRYPDPLIK 155
Score = 116 bits (280), Expect = 1e-26
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +3
Query: 42 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 221
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 222 VLKIVKQR 245
V+ I+ QR
Sbjct: 61 VISILMQR 68
Score = 111 bits (267), Expect = 5e-25
Identities = 46/80 (57%), Positives = 64/80 (80%)
Frame = +1
Query: 487 PRPTYQSHDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVH 666
P P +++D+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H
Sbjct: 150 PDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIH 209
Query: 667 IKDSTGHTFATRLNNVFIIG 726
++D+ GH FATRL NVF IG
Sbjct: 210 VEDALGHAFATRLGNVFTIG 229
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 130 bits (314), Expect = 1e-30
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +2
Query: 254 VDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVAT 433
VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V
Sbjct: 72 VDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQF 131
Query: 434 GPKNVPYLVTHDGRTIRYPDPLIK 505
G K +PYL T+DGRTIRYPDP+IK
Sbjct: 132 GQKGIPYLNTYDGRTIRYPDPIIK 155
Score = 116 bits (280), Expect = 1e-26
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +3
Query: 42 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 221
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 222 VLKIVKQR 245
V+ I+ QR
Sbjct: 61 VISILMQR 68
Score = 111 bits (266), Expect = 7e-25
Identities = 46/80 (57%), Positives = 64/80 (80%)
Frame = +1
Query: 487 PRPTYQSHDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVH 666
P P +++D+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H
Sbjct: 150 PDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIH 209
Query: 667 IKDSTGHTFATRLNNVFIIG 726
++D+ GH FATRL NVF IG
Sbjct: 210 VEDALGHQFATRLGNVFTIG 229
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 186 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 85
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 719 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 597
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 199 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 71
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 158 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 45
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 83 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 247
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 617 APSCPARDI--PAPSTLCTSRTPRDTPSP 697
AP P+ D PAP T T +P TPSP
Sbjct: 70 APDAPSGDFFPPAPPTTTTPTSPGTTPSP 98
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 698 VAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPD 567
V KV PV+SL C + C+S + + PVI+ + D
Sbjct: 165 VLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYID 208
>03_05_0206 + 21975077-21975673,21975733-21975831
Length = 231
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 517 WNRDFDKWVWVADGAAIMR 461
+NR FD WVW +D ++I R
Sbjct: 146 YNRTFDYWVWSSDPSSIPR 164
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 335 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 439
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>07_03_1029 + 23379890-23380139,23380506-23381131
Length = 291
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 424 CGDRT*ECSVLGNA*WPHHPLPRPTYQSH 510
CG T E S++ W +HP P+P+ H
Sbjct: 161 CGGGTIELSMIKTWLWSNHPQPQPSPPQH 189
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -3
Query: 694 RRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 599
+RC+P S A +CR+SR S+ W P+ S+
Sbjct: 423 QRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>04_04_1303 - 32487174-32487871,32488583-32489123
Length = 412
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 702 PRGEGVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPR 568
P GE ++R VL V AG++ G H P + R T+ P+
Sbjct: 170 PGGEEIARSVLRVR----AGLACRGTQAFHPPDIHRGRAATRTPK 210
>03_05_0208 + 22006032-22006673,22006695-22007078
Length = 341
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 517 WNRDFDKWVWVADGAAI 467
+NR FD WVW +D ++I
Sbjct: 156 YNRTFDVWVWTSDPSSI 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,253,019
Number of Sequences: 37544
Number of extensions: 510831
Number of successful extensions: 1719
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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