Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30073
(734 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 91 1e-18
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 87 2e-17
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 87 2e-17
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 87 3e-17
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 87 3e-17
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 86 4e-17
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 84 2e-16
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 82 7e-16
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 82 7e-16
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 81 1e-15
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 81 2e-15
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 81 2e-15
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 81 2e-15
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 81 2e-15
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 81 2e-15
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 80 4e-15
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 79 5e-15
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 79 6e-15
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 78 1e-14
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 78 1e-14
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 78 1e-14
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 75 8e-14
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 73 4e-13
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 66 5e-11
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 66 5e-11
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 64 2e-10
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 63 3e-10
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 63 3e-10
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 62 1e-09
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 60 4e-09
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 53 4e-07
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 53 4e-07
BT021226-1|AAX33374.1| 355|Drosophila melanogaster RH50989p pro... 29 8.7
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 91.1 bits (216), Expect = 1e-18
Identities = 51/120 (42%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN +T+ DRYP+ +I D L +K FST+DL +HQI + +D PKTA
Sbjct: 262 DYRKLNEKTISDRYPIPNIADILDRLGKAKYFSTLDLASGFHQIEMNPDDTPKTAFTVEG 321
Query: 321 GLFEFPFMTFGLRNAGQTFQRFMMRSHGVLIS-----------VFPTLMTSSFIQLMRIF 175
G +EF M FGL+NA TFQR M G LI +F T + FI L IF
Sbjct: 322 GHYEFIRMPFGLKNAPATFQRVMDNIFGDLIGTICLVYLDDIIIFSTSLQEHFIHLKTIF 381
Score = 54.8 bits (126), Expect = 1e-07
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI++ S H HL+T+F RL+ + +K E FLG+ ++ EG
Sbjct: 356 CLVYLDDIIIFSTSLQEHFIHLKTIFGRLRSANFKVQLTKSYFLRRETEFLGHIVSQEGV 415
Query: 46 RPPQARIQVLLDFP 5
RP +I+ + +FP
Sbjct: 416 RPNPNKIEAIKNFP 429
Score = 37.1 bits (82), Expect = 0.025
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 692 HFIKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
H IKTTD PI + R KK+ E M+ + S S WS+P+ + KK
Sbjct: 193 HTIKTTDDTPIHTKSYRYPYIHKEEVKKQIEAMLNQDIIKSSYSPWSAPVWVVPKK 248
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 87.0 bits (206), Expect = 2e-17
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN +T+ DRYP+ +I+D ++ +K FST+DL +HQI + +D+ KTA
Sbjct: 376 DYRKLNDKTISDRYPIPNINDILDSIGKAKYFSTLDLTSGFHQIEMNPKDIAKTAFTVEG 435
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +EF M FGL+NA TFQR M
Sbjct: 436 GHYEFTRMPFGLKNAPATFQRVM 458
Score = 52.4 bits (120), Expect = 6e-07
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI++ S HL ++ +FE+L+ + PSK E+ FLG+ + +G
Sbjct: 470 CLFYLDDIIIFSPSLQKHLLDIKMVFEKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDGV 529
Query: 46 RPPQARIQVLLDFP 5
+P +I + FP
Sbjct: 530 KPNPNKISAIKKFP 543
Score = 36.3 bits (80), Expect = 0.043
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -1
Query: 692 HFIKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDD 519
H I T D PI + R KK+ E M+ R S S WS+P+ + KK D
Sbjct: 307 HSIPTIDNTPIHTKSYRYPFVHKTEVKKQIESMLDQQIIRSSHSPWSAPVWVVPKKLD 364
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 87.0 bits (206), Expect = 2e-17
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN T+ D+YP+ ++ + L G F+TIDL+K +HQI + E +PKTA T
Sbjct: 214 DYRYLNEITIADKYPIPNMDEILSKLGGCNYFTTIDLIKGFHQIEMDPESIPKTAFTTKT 273
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +E+ M FGL+NA TFQR M
Sbjct: 274 GHYEYTRMPFGLKNAPATFQRCM 296
Score = 54.4 bits (125), Expect = 2e-07
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI+V SA HL+ LR +F+ L + + KC + FLG+ ++ EG
Sbjct: 308 CMVYLDDIIVFSASLEEHLQSLRAVFQALSNANLKLQLDKCEFLKHDTYFLGHMVSPEGI 367
Query: 46 RPPQARIQVLLDFP 5
RP +++ + ++P
Sbjct: 368 RPNPEKLRAIENYP 381
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 86.6 bits (205), Expect = 3e-17
Identities = 42/81 (51%), Positives = 51/81 (62%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
D+R LN RTVPDRYP+ +I NL +K F+T+DL YHQI +AE D KTA
Sbjct: 219 DFRKLNERTVPDRYPMPNISMILGNLGKAKYFTTLDLKSGYHQITLAERDREKTAFAVNG 278
Query: 321 GLFEFPFMTFGLRNAGQTFQR 259
G +EF + FGLRNA FQR
Sbjct: 279 GKYEFRRLPFGLRNAASIFQR 299
Score = 56.8 bits (131), Expect = 3e-08
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = -2
Query: 229 FCFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEG 50
FC+ YVDD+++ S DEN H+KH+ + + L + + I+ K V+FLG+ + + G
Sbjct: 312 FCYVYVDDVIIFSEDENDHVKHVDWVLKSLYDANMRISAEKSRFFKKSVSFLGFIVTNNG 371
Query: 49 TRPPQARIQVLLDFP 5
+++ + +FP
Sbjct: 372 AATDPEKVKAIKEFP 386
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 86.6 bits (205), Expect = 3e-17
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN T+ DR+P+ +I + L K+FST+DL K ++QI + +DV KTA T
Sbjct: 192 DYRKLNKETIEDRFPIPNIDEIFDKLGDCKIFSTLDLAKGFYQIEMDNKDVHKTAFSTTS 251
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +EF M FGLRNA TFQR M
Sbjct: 252 GHYEFLRMPFGLRNAPSTFQRLM 274
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = -2
Query: 229 FCFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEG 50
FC Y+DDIL+ S + H+ HL +F L + + + KC +E+ FLG+ INSEG
Sbjct: 285 FCIVYMDDILIFSKNIGEHVNHLSCIFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEG 344
Query: 49 TRPPQARIQVL 17
+P Q +I +
Sbjct: 345 LKPSQKKIDAI 355
Score = 28.7 bits (61), Expect = 8.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 692 HFIKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDD 519
H I T + PI + + ++ +M+ G R SKS ++SPL + KK D
Sbjct: 123 HRIITKNDLPIYSKTYKYPEIHKDEVNRQIAEMLDQGIIRHSKSPYNSPLWVVQKKMD 180
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 86.2 bits (204), Expect = 4e-17
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN T+PDRYP+ ++ + L + F+TIDL K +HQI + EE + KTA T
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +E+ M FGLRNA TFQR M
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCM 348
Score = 52.4 bits (120), Expect = 6e-07
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI++ S HL ++ +F +L + + + KC E NFLG+ + +G
Sbjct: 360 CLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGI 419
Query: 46 RPPQARIQVLLDFP 5
+P +++ ++ +P
Sbjct: 420 KPNPIKVKAIVSYP 433
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 84.2 bits (199), Expect = 2e-16
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN T+ DRYP+ +I + L S F+TIDL K +HQI + E + KTA T +
Sbjct: 229 DYRKLNEITINDRYPMPNIDEILGKLGRSNYFTTIDLAKGFHQIEMDSESIAKTAFSTKY 288
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +E+ M FGL+NA TFQR M
Sbjct: 289 GHYEYTRMPFGLKNAPATFQRCM 311
Score = 56.8 bits (131), Expect = 3e-08
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI+V S HL+ L +FE+L + + + KC E FLG+ I +G
Sbjct: 323 CLVYLDDIIVFSTSLEEHLQSLEAVFEKLSQANLKLQLDKCEFLRQETTFLGHVITKDGI 382
Query: 46 RPPQARIQVLLDFP 5
+P +I+ + D+P
Sbjct: 383 KPNPEKIKAIQDYP 396
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 82.2 bits (194), Expect = 7e-16
Identities = 44/97 (45%), Positives = 57/97 (58%)
Frame = -3
Query: 549 TTAYDN*KRRHLASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQI 370
T A+ N +R + D+R LN RT+PDRYP+ I NL +K F+T+DL YHQI
Sbjct: 204 TDAFGNPNKRLVI---DFRKLNERTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQI 260
Query: 369 PIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQR 259
+AE D KT+ G +EF + FGLRNA FQR
Sbjct: 261 YLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQR 297
Score = 52.8 bits (121), Expect = 5e-07
Identities = 18/74 (24%), Positives = 46/74 (62%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ YVDD+++ S +E+ H++H+ T+ + L + + ++ K + V +LG+ ++ +GT
Sbjct: 311 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 370
Query: 46 RPPQARIQVLLDFP 5
+ +++ + ++P
Sbjct: 371 KSDPEKVKAIQEYP 384
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 686 IKTTDGPPIXCR--PRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T D P+ R P + V E + +++ G RPS+S ++SP + KK
Sbjct: 149 IRTVDNEPVYSRAYPNLMGVSDFV--NNEVKQLLKDGIIRPSRSPYNSPTWVVDKK 202
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 82.2 bits (194), Expect = 7e-16
Identities = 44/97 (45%), Positives = 57/97 (58%)
Frame = -3
Query: 549 TTAYDN*KRRHLASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQI 370
T A+ N +R + D+R LN RT+PDRYP+ I NL +K F+T+DL YHQI
Sbjct: 204 TDAFGNPNKRLVI---DFRKLNERTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQI 260
Query: 369 PIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQR 259
+AE D KT+ G +EF + FGLRNA FQR
Sbjct: 261 YLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQR 297
Score = 52.8 bits (121), Expect = 5e-07
Identities = 18/74 (24%), Positives = 46/74 (62%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ YVDD+++ S +E+ H++H+ T+ + L + + ++ K + V +LG+ ++ +GT
Sbjct: 311 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 370
Query: 46 RPPQARIQVLLDFP 5
+ +++ + ++P
Sbjct: 371 KSDPEKVKAIQEYP 384
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 686 IKTTDGPPIXCR--PRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T D P+ R P + V E + +++ G RPS+S ++SP + KK
Sbjct: 149 IRTVDNEPVYSRAYPNLMGVSDFV--NNEVKQLLKDGIIRPSRSPYNSPTWVVDKK 202
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 81.4 bits (192), Expect = 1e-15
Identities = 40/91 (43%), Positives = 53/91 (58%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
D+R LN +TV DRYP+ +I D ++ + F+TIDL +HQI + D KTA
Sbjct: 244 DFRKLNEKTVSDRYPIPNIADILDSIGKTMYFTTIDLASGFHQIQMNPRDASKTAFTVEN 303
Query: 321 GLFEFPFMTFGLRNAGQTFQRFMMRSHGVLI 229
G +EF M FGL+NA TFQR M G L+
Sbjct: 304 GHYEFTRMPFGLKNAPATFQRVMDNVLGDLV 334
Score = 60.1 bits (139), Expect = 3e-09
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI+V S H+ ++++F +LQ + I PSKC+ E++FLG+ + EG
Sbjct: 338 CLVYLDDIIVFSPSLQKHIADIKSVFTKLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGV 397
Query: 46 RPPQARIQVL 17
+P +IQ +
Sbjct: 398 KPNPLKIQTI 407
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 692 HFIKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDD 519
H I TTD PI + R +K+ M++ + S S WS+P+ + KK D
Sbjct: 175 HSIPTTDNIPIHTKSYRYPFVHKDEVRKQISKMLEQNIIKNSHSPWSAPVWVVPKKSD 232
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 81.0 bits (191), Expect = 2e-15
Identities = 43/97 (44%), Positives = 57/97 (58%)
Frame = -3
Query: 549 TTAYDN*KRRHLASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQI 370
T A+ N +R + D+R LN +T+PDRYP+ I NL +K F+T+DL YHQI
Sbjct: 204 TDAFGNPNKRLVI---DFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQI 260
Query: 369 PIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQR 259
+AE D KT+ G +EF + FGLRNA FQR
Sbjct: 261 YLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQR 297
Score = 52.8 bits (121), Expect = 5e-07
Identities = 18/74 (24%), Positives = 46/74 (62%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ YVDD+++ S +E+ H++H+ T+ + L + + ++ K + V +LG+ ++ +GT
Sbjct: 311 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 370
Query: 46 RPPQARIQVLLDFP 5
+ +++ + ++P
Sbjct: 371 KSDPEKVKAIQEYP 384
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 686 IKTTDGPPIXCR--PRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T D P+ R P + V E + +++ G RPS+S ++SP + KK
Sbjct: 149 IRTVDNEPVYSRAYPTLMGVSDFV--NNEVKQLLKDGIIRPSRSPYNSPTWVVDKK 202
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 81.0 bits (191), Expect = 2e-15
Identities = 43/97 (44%), Positives = 57/97 (58%)
Frame = -3
Query: 549 TTAYDN*KRRHLASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQI 370
T A+ N +R + D+R LN +T+PDRYP+ I NL +K F+T+DL YHQI
Sbjct: 239 TDAFGNPNKRLVI---DFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQI 295
Query: 369 PIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQR 259
+AE D KT+ G +EF + FGLRNA FQR
Sbjct: 296 YLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQR 332
Score = 51.6 bits (118), Expect = 1e-06
Identities = 18/74 (24%), Positives = 45/74 (60%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ YVDD+++ S +E+ H++H+ T+ + L + + ++ K + V +LG+ ++ +GT
Sbjct: 346 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFTESVEYLGFIVSKDGT 405
Query: 46 RPPQARIQVLLDFP 5
+++ + ++P
Sbjct: 406 ISDPEKVKAIQEYP 419
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 686 IKTTDGPPIXCR--PRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T D P+ R P + V E + +++ G RPS+S ++SP + KK
Sbjct: 184 IRTVDNEPVYSRAYPTLMGVSDFV--NNEVKQLLKDGIIRPSRSPYNSPTWVVDKK 237
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 81.0 bits (191), Expect = 2e-15
Identities = 43/97 (44%), Positives = 57/97 (58%)
Frame = -3
Query: 549 TTAYDN*KRRHLASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQI 370
T A+ N +R + D+R LN +T+PDRYP+ I NL +K F+T+DL YHQI
Sbjct: 239 TDAFGNPNKRLVI---DFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQI 295
Query: 369 PIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQR 259
+AE D KT+ G +EF + FGLRNA FQR
Sbjct: 296 YLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQR 332
Score = 52.8 bits (121), Expect = 5e-07
Identities = 18/74 (24%), Positives = 46/74 (62%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ YVDD+++ S +E+ H++H+ T+ + L + + ++ K + V +LG+ ++ +GT
Sbjct: 346 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 405
Query: 46 RPPQARIQVLLDFP 5
+ +++ + ++P
Sbjct: 406 KSDPEKVKAIQEYP 419
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 686 IKTTDGPPIXCR--PRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T D P+ R P + V E + +++ G RPS+S ++SP + KK
Sbjct: 184 IRTVDNEPVYSRAYPTLMGVSDFV--NNEVKQLLKDGIIRPSRSPYNSPTWVVDKK 237
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 81.0 bits (191), Expect = 2e-15
Identities = 43/97 (44%), Positives = 57/97 (58%)
Frame = -3
Query: 549 TTAYDN*KRRHLASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQI 370
T A+ N +R + D+R LN +T+PDRYP+ I NL +K F+T+DL YHQI
Sbjct: 657 TDAFGNPNKRLVI---DFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQI 713
Query: 369 PIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQR 259
+AE D KT+ G +EF + FGLRNA FQR
Sbjct: 714 YLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQR 750
Score = 52.8 bits (121), Expect = 5e-07
Identities = 18/74 (24%), Positives = 46/74 (62%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ YVDD+++ S +E+ H++H+ T+ + L + + ++ K + V +LG+ ++ +GT
Sbjct: 764 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 823
Query: 46 RPPQARIQVLLDFP 5
+ +++ + ++P
Sbjct: 824 KSDPEKVKAIQEYP 837
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 686 IKTTDGPPIXCR--PRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T D P+ R P + V E + +++ G RPS+S ++SP + KK
Sbjct: 602 IRTVDNEPVYSRAYPTLMGVSDFV--NNEVKQLLKDGIIRPSRSPYNSPTWVVDKK 655
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 80.6 bits (190), Expect = 2e-15
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
D+R LN +T+PDRYP+ I NL +K F+T+DL YHQI +AE D KT+
Sbjct: 222 DFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNG 281
Query: 321 GLFEFPFMTFGLRNAGQTFQR 259
G +EF + FGLRNA FQR
Sbjct: 282 GKYEFCRLPFGLRNASSIFQR 302
Score = 52.8 bits (121), Expect = 5e-07
Identities = 18/74 (24%), Positives = 46/74 (62%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ YVDD+++ S +E+ H++H+ T+ + L + + ++ K + V +LG+ ++ +GT
Sbjct: 316 CYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGT 375
Query: 46 RPPQARIQVLLDFP 5
+ +++ + ++P
Sbjct: 376 KSDPEKVKAIQEYP 389
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 686 IKTTDGPPIXCR--PRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T D P+ R P + V E + +++ G RPS+S ++SP + KK
Sbjct: 154 IRTVDNEPVYSRAYPTLMGVSDFV--NNEVKQLLKDGIIRPSRSPYNSPTWVVDKK 207
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 79.8 bits (188), Expect = 4e-15
Identities = 39/83 (46%), Positives = 50/83 (60%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN TV D+YP+ + + L + F+TIDL K +HQI + E + KTA T
Sbjct: 255 DYRNLNEITVDDKYPIPVMDEILDKLGNCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKN 314
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G FE+ M FGL+NA TFQR M
Sbjct: 315 GHFEYTRMPFGLKNAPATFQRCM 337
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI+V+S H+ LR +F +L+E + + KC E FLG+ I ++G
Sbjct: 349 CLVYLDDIIVYSTSLEEHIMSLRKVFLKLREANLKLQLDKCEFLKKETEFLGHIITTDGI 408
Query: 46 RPPQARIQVLLDFP 5
+P A+I+ +++FP
Sbjct: 409 KPNPAKIKAVVNFP 422
Score = 35.1 bits (77), Expect = 0.100
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 698 TVHFIKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDD 519
T H I T PI RP + + + +DM++ G R S S + SP+ + KK D
Sbjct: 184 TKHVITTKHEDPIYRRPYKYPQSFDEEVENQMKDMIRQGIIRKSNSPYCSPVWVVPKKPD 243
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 79.4 bits (187), Expect = 5e-15
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
D++ LN T+PD YP+ I+ +L +K F+T+DL +HQI + E D+PKTA T
Sbjct: 183 DFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLN 242
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +EF + FGL+NA FQR +
Sbjct: 243 GKYEFLRLPFGLKNAPAIFQRMI 265
Score = 54.8 bits (126), Expect = 1e-07
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C+ Y+DDI+V S D + H K+LR + L + + +N K +V FLGY + ++G
Sbjct: 277 CYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGI 336
Query: 46 RPPQARIQVLLDFPP 2
+ +++ + + PP
Sbjct: 337 KADPKKVRAISEMPP 351
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 686 IKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
I+T PI + +++ ++++Q G RPS S ++SP+ + KK
Sbjct: 116 IRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKK 169
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 79.0 bits (186), Expect = 6e-15
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN TV DRYP+ I++ L +K+FS +DL +HQI + E D+ KTA
Sbjct: 98 DYRKLNMVTVADRYPIPDINEVLAQLGDNKIFSVLDLKSGFHQILLKESDIEKTAFSINN 157
Query: 321 GLFEFPFMTFGLRNAGQTFQR----FMMRSHGVLISVFPTLMTSSF 196
G +EF + FGL+NA FQR + R++ V F +SSF
Sbjct: 158 GKYEFTRLPFGLKNAPSIFQRALDGYSSRTYRVRYVSFILTTSSSF 203
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = -2
Query: 193 SADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTRPPQARIQVLL 14
S D+ H ++L T+F LQ+ + KC +V FLG+ ++ +G ++Q +
Sbjct: 204 SKDDETHYQNLDTIFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGIETSPTKVQAIS 263
Query: 13 DFP 5
DFP
Sbjct: 264 DFP 266
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 686 IKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDDT 516
I+T PI + + K+ +++ G RPS+S ++SP+ + KK D+
Sbjct: 31 IRTISDTPIYSKFYQYPMSLKDEVHKQISELLHDGIIRPSRSPYNSPVWIVPKKLDS 87
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 78.2 bits (184), Expect = 1e-14
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN TV DRYP+ I++ L +K+FS +DL +HQI + E D+ KTA
Sbjct: 255 DYRKLNMVTVADRYPIPDINEVLAQLGDNKIFSVLDLKSGFHQILLKESDIEKTAFSINN 314
Query: 321 GLFEFPFMTFGLRNAGQTFQR 259
G +EF + FGL+NA FQR
Sbjct: 315 GKYEFTRLPFGLKNAPSIFQR 335
Score = 61.3 bits (142), Expect = 1e-09
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
CF Y+DDI++ S D+ H ++L T+F LQ+ + KC +V FLG+ ++ +G
Sbjct: 349 CFIYIDDIIIFSKDDETHYQNLDTIFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGI 408
Query: 46 RPPQARIQVLLDFP 5
++Q + DFP
Sbjct: 409 ETSPTKVQAISDFP 422
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 686 IKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDDT 516
I+T PI + + K+ +++ G RPS+S ++SP+ + KK D+
Sbjct: 188 IRTISDTPIYSKFYQYPMSLKDEVHKQISELLHDGIIRPSRSPYNSPVWIVPKKLDS 244
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 77.8 bits (183), Expect = 1e-14
Identities = 39/83 (46%), Positives = 50/83 (60%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN TV DR+P+ ++ + L F+TIDL K +HQI + E V KTA T
Sbjct: 267 DYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKH 326
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +E+ M FGL+NA TFQR M
Sbjct: 327 GHYEYLRMPFGLKNAPATFQRCM 349
Score = 52.0 bits (119), Expect = 8e-07
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI+V S + HL+ L +FE+L + + + KC E FLG+ + +G
Sbjct: 361 CLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGI 420
Query: 46 RPPQARIQVLLDFP 5
+P +I+ + +P
Sbjct: 421 KPNPEKIEAIQKYP 434
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR LN TV D++P+ + + L + F+TIDL K +HQI + E + KTA T
Sbjct: 340 DYRNLNEITVNDKFPIPRMDEILDKLGRCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKH 399
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G +E+ M FGL+NA TFQR M
Sbjct: 400 GHYEYTRMPFGLKNAPATFQRCM 422
Score = 53.2 bits (122), Expect = 4e-07
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = -2
Query: 226 CFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGT 47
C Y+DDI+V+S H+ L+ +FE+L++ + + KC E FLG+ + + G
Sbjct: 434 CLVYLDDIIVYSTPLEEHILSLKKVFEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGI 493
Query: 46 RPPQARIQVLLDFP 5
+P + + + +FP
Sbjct: 494 KPNPNKTKAITNFP 507
Score = 36.3 bits (80), Expect = 0.043
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 692 HFIKTTDGPPIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDD 519
H I+T P+ +P + K+ ++M++ G R SKS + SP+ + KK D
Sbjct: 271 HVIQTQHEDPVYRKPYKYPQSVDQEVNKQIKEMIEQGIVRKSKSPYCSPIWVVPKKAD 328
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 75.4 bits (177), Expect = 8e-14
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
D+R LN +T+ D+YP+ ++ NL ++ F+T+DL A+HQI +AE+D KTA
Sbjct: 248 DFRKLNLKTIDDKYPIPNVVWILSNLGKARFFTTLDLKSAFHQILLAEKDRAKTAFSVGN 307
Query: 321 GLFEFPFMTFGLRNAGQTFQR 259
G +EF + FGL+NA FQR
Sbjct: 308 GKYEFCRLPFGLKNAPSIFQR 328
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 72.9 bits (171), Expect = 4e-13
Identities = 34/92 (36%), Positives = 51/92 (55%)
Frame = -3
Query: 528 KRRHLASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDV 349
K L C D+R LN T+ D YP+ I D ++ VF+ +DL + + + +E +
Sbjct: 762 KTGDLRMCVDFRKLNKMTMKDNYPLPLIDDLLDRMNEKTVFTKLDLKNGFFHVHVKKESI 821
Query: 348 PKTAIVTPFGLFEFPFMTFGLRNAGQTFQRFM 253
T+ VTP G +E+ M FGL+NA FQRF+
Sbjct: 822 KYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFV 853
Score = 52.8 bits (121), Expect = 5e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -2
Query: 217 YVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTRPP 38
Y+DDIL+ + + N HL+ L+ +F+RL E + + KC + +LG+ IN +G P
Sbjct: 869 YMDDILLATENINEHLETLKEIFKRLVENKLELRIDKCEFMQSSIKYLGFIINKDGIMPN 928
Query: 37 QARIQVLLDFP 5
I+ + +FP
Sbjct: 929 DKGIEAIKNFP 939
Score = 35.9 bits (79), Expect = 0.057
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -1
Query: 665 PIXCRPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKK 525
P C PRRL+ + +K ++ +++G RPS S ++SP+ + KK
Sbjct: 716 PFSCSPRRLSYTEKDRLQKLLDEYLENGFIRPSDSEYASPIVLVKKK 762
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 66.1 bits (154), Expect = 5e-11
Identities = 38/110 (34%), Positives = 55/110 (50%)
Frame = -3
Query: 516 LASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTA 337
L C DYR LN + D +PV + + L +K F+T+DL + + + E P TA
Sbjct: 538 LRVCVDYRKLNTMVLMDCFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTA 597
Query: 336 IVTPFGLFEFPFMTFGLRNAGQTFQRFMMRSHGVLISVFPTLMTSSFIQL 187
VT GLFEF FG +N+ F RF+ +F L+ S+ +QL
Sbjct: 598 FVTREGLFEFNKAPFGFKNSPAAFIRFVQ-------FIFQELINSNIMQL 640
Score = 35.9 bits (79), Expect = 0.057
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -2
Query: 217 YVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTRPP 38
Y+DDI+V++A ++ + +R E+G+ I KC ++FLG+ I P
Sbjct: 641 YMDDIIVYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQICPG 700
Query: 37 QARIQVLLDF 8
+ + + F
Sbjct: 701 KEKTSAVNSF 710
Score = 31.9 bits (69), Expect = 0.93
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 644 RLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDDTWR 510
RL+ ++ +A KK+ E+ V+ R S S +S + + KKD T R
Sbjct: 495 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVRKKDGTLR 539
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 66.1 bits (154), Expect = 5e-11
Identities = 38/110 (34%), Positives = 55/110 (50%)
Frame = -3
Query: 516 LASCGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTA 337
L C DYR LN + D +PV + + L +K F+T+DL + + + E P TA
Sbjct: 232 LRVCVDYRKLNTMVLMDCFPVPIMEEVLEKLQSAKWFTTMDLQNGFFHVAVEEASKPYTA 291
Query: 336 IVTPFGLFEFPFMTFGLRNAGQTFQRFMMRSHGVLISVFPTLMTSSFIQL 187
VT GLFEF FG +N+ F RF+ +F L+ S+ +QL
Sbjct: 292 FVTREGLFEFNKAPFGFKNSPAAFIRFVQ-------FIFQELINSNIMQL 334
Score = 35.9 bits (79), Expect = 0.057
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -2
Query: 217 YVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTRPP 38
Y+DDI+V++A ++ + +R E+G+ I KC ++FLG+ I P
Sbjct: 335 YMDDIIVYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQRRIHFLGHIIEGGQICPG 394
Query: 37 QARIQVLLDF 8
+ + + F
Sbjct: 395 KEKTSAVNSF 404
Score = 31.9 bits (69), Expect = 0.93
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 644 RLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDDTWR 510
RL+ ++ +A KK+ E+ V+ R S S +S + + KKD T R
Sbjct: 189 RLSEEEAIAVKKQVEEWVEQSIVRKSTSNVASRIVVVKKKDGTLR 233
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 64.1 bits (149), Expect = 2e-10
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR +N + + D++P+ I D L +K FS +DL+ +HQI + E+ T+ T
Sbjct: 269 DYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELEEDSRNITSFSTSS 328
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G + F + +GL+ A +FQR M
Sbjct: 329 GSYRFTRLPYGLKIAPNSFQRMM 351
Score = 48.8 bits (111), Expect = 8e-06
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = -2
Query: 223 FPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTR 44
F Y+DD++V E K+L +FE ++ + ++P KC+ + EV FLG+ +G
Sbjct: 364 FLYMDDLIVIGCSEKHMTKNLTNVFELCRKNNLKLHPDKCSFFMSEVTFLGHKCTDKGIL 423
Query: 43 PPQARIQVLLDFP 5
P + + +P
Sbjct: 424 PDDTKYDAIQRYP 436
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 63.3 bits (147), Expect = 3e-10
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR +N + + D++P+ I D L +K FS +DL+ +HQI + E T+ T
Sbjct: 375 DYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSN 434
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G + F + FGL+ A +FQR M
Sbjct: 435 GSYRFTRLPFGLKIAPNSFQRMM 457
Score = 56.4 bits (130), Expect = 4e-08
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = -2
Query: 223 FPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTR 44
F Y+DD++V E LK+L +F + +EY + ++P KC+ + EV FLG+ +G
Sbjct: 470 FLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGIL 529
Query: 43 PPQARIQVLLDFP 5
P + V+ ++P
Sbjct: 530 PDDKKYDVIQNYP 542
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 63.3 bits (147), Expect = 3e-10
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR +N + + D++P+ I D L +K FS +DL+ +HQI + E T+ T
Sbjct: 138 DYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSN 197
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G + F + FGL+ A +FQR M
Sbjct: 198 GSYRFTRLPFGLKIAPNSFQRMM 220
Score = 56.4 bits (130), Expect = 4e-08
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = -2
Query: 223 FPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTR 44
F Y+DD++V E LK+L +F + +EY + ++P KC+ + EV FLG+ +G
Sbjct: 233 FLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGIL 292
Query: 43 PPQARIQVLLDFP 5
P + V+ ++P
Sbjct: 293 PDDKKYDVIQNYP 305
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 61.7 bits (143), Expect = 1e-09
Identities = 35/96 (36%), Positives = 51/96 (53%)
Frame = -3
Query: 507 CGDYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVT 328
C D+R LN+ T+ D+YP+ I D L G+ F+ +D+ +HQIPI E V TA
Sbjct: 510 CVDFRELNSNTISDKYPLPLISDQIARLRGANYFTCLDMASGFHQIPIHPESVEYTA--- 566
Query: 327 PFGLFEFPFMTFGLRNAGQTFQRFMMRSHGVLISVF 220
F+ GL+NA FQR ++ + G L + F
Sbjct: 567 --------FVPDGLKNAPSVFQRTVINALGDLANSF 594
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = -2
Query: 229 FCFPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEG 50
F Y+DDI+V S + L L+ L+T+ L + G N +KC+ V +LGY + +
Sbjct: 594 FVIVYMDDIMVVSPTKELALERLKTVLNVLTKAGFTFNLAKCSFLKTTVQYLGYEVRAGE 653
Query: 49 TRPPQARIQVLLDFPP 2
RP +I L PP
Sbjct: 654 IRPNVRKIASLSSLPP 669
Score = 35.1 bits (77), Expect = 0.100
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = -1
Query: 653 RPRRLAPQKLVAAKKEFEDMVQSGTARPSKSAWSSPLHMTIKKDDTWR 510
RP RL+P++ + + ++++ RPS S ++SP+ + KK+ T R
Sbjct: 461 RPYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDR 508
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 59.7 bits (138), Expect = 4e-09
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = -3
Query: 501 DYRALNARTVPDRYPVRHIHDFAHNLSGSKVFSTIDLVKAYHQIPIAEEDVPKTAIVTPF 322
DYR +N + + D++P+ I D L +K FS +DL+ +HQI + + T+ T
Sbjct: 130 DYRQINKKLLSDKFPLPRIEDILDQLGRAKYFSCLDLMSGFHQIELEKRYRDITSFSTAN 189
Query: 321 GLFEFPFMTFGLRNAGQTFQRFM 253
G + F + +GL+ A +FQR M
Sbjct: 190 GSYRFTRLPYGLKVAPNSFQRRM 212
Score = 52.4 bits (120), Expect = 6e-07
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = -2
Query: 223 FPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTR 44
F Y+DD++V E LK+L +FE + + + ++P KC+ + EV +LG+ +G
Sbjct: 225 FLYMDDLVVIGCSEKHMLKNLTNVFELCRRHNLKLHPGKCSFFMKEVTYLGHKCTDKGIL 284
Query: 43 PPQARIQVLLDFP 5
P + +V+ +P
Sbjct: 285 PDDTKYEVIEKYP 297
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 53.2 bits (122), Expect = 4e-07
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = -2
Query: 223 FPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTR 44
F Y+DD++V E +K+L +F ++Y + ++P KC+ + EV FLG+ +G
Sbjct: 59 FLYMDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVL 118
Query: 43 PPQARIQVLLDFP 5
P + V+ ++P
Sbjct: 119 PDDKKYDVIKNYP 131
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 390 VKAYHQIPIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQRFM 253
+ +HQI + E T+ T G + F + FGL+ A +FQR M
Sbjct: 1 MSGFHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 46
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 53.2 bits (122), Expect = 4e-07
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = -2
Query: 223 FPYVDDILVHSADENLHLKHLRTLFERLQEYGVVINPSKCTLGVDEVNFLGYHINSEGTR 44
F Y+DD++V E +K+L +F ++Y + ++P KC+ + EV FLG+ +G
Sbjct: 59 FLYMDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVL 118
Query: 43 PPQARIQVLLDFP 5
P + V+ ++P
Sbjct: 119 PDDKKYDVIKNYP 131
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 390 VKAYHQIPIAEEDVPKTAIVTPFGLFEFPFMTFGLRNAGQTFQRFM 253
+ +HQI + E T+ T G + F + FGL+ A +FQR M
Sbjct: 1 MSGFHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 46
>BT021226-1|AAX33374.1| 355|Drosophila melanogaster RH50989p
protein.
Length = 355
Score = 28.7 bits (61), Expect = 8.7
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +1
Query: 175 EDSHQLNERGCHQRRENRNQDPV*PHHKSLECLSRVSKPKSHEWEFEEAKRCNNCCLRHV 354
ED L E G + + DP+ +L L ++ KP WE ++ C+N L +
Sbjct: 7 EDDEALQE-GEEEEAAEQEDDPL----ANLLSL-KLKKPPHWNWELSTSRSCSNIALPRI 60
Query: 355 LLSD 366
LL D
Sbjct: 61 LLYD 64
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,306,377
Number of Sequences: 53049
Number of extensions: 779042
Number of successful extensions: 1774
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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