Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30072
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_56| Best HMM Match : Actin (HMM E-Value=0) 165 2e-41
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 165 2e-41
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 89 2e-18
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 79 4e-15
SB_54| Best HMM Match : Actin (HMM E-Value=0) 77 1e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 50 2e-06
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 49 4e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 47 1e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 38 0.005
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.62
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.4
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_11892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 95.1 bits (226), Expect = 4e-20
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIV+ SGDGV+HTVPIYEGYAL HAI+RLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 106
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 107 EAPLNPKANREKMTQIMFETFN 128
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIV+ SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 106
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 107 EAPLNPKANREKMTQIMFETFN 128
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIV+ SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIV+ SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/41 (87%), Positives = 38/41 (92%), Gaps = 2/41 (4%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYE--GYA 627
MYVAIQAVLSLYASGRTTGIV+ SGDGVSHTVPIYE GY+
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIV+ SGDGV+HTVPIYEGYAL HAI+RLD
Sbjct: 95 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 142
Score = 81.8 bits (193), Expect = 4e-16
Identities = 37/43 (86%), Positives = 37/43 (86%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHT 385
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KI T
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFET 89
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
+YVAIQAVLSLYASGRTTG+V SGDGVSH VPIYEGYAL HAILRLD
Sbjct: 11 VYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLD 58
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 83.4 bits (197), Expect = 1e-16
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 239 SGRDGRMGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHT-XYNELRVAPE 415
S + G + KD VGDEA R +L + YP+++GIV NWDDM +W +T +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 416 XHPVLLTEAPLNPKANXEKMTQIMFXTF 499
VLLTE PLNP N EKM ++MF +
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENY 131
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +1
Query: 499 QXAPMYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
Q +Y+AIQAVL+LYA G TG+V+ SGDGV+H P+YEG+AL H RLD
Sbjct: 132 QFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLD 183
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 135 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 78.6 bits (185), Expect = 4e-15
Identities = 32/48 (66%), Positives = 45/48 (93%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
+++++QAVLSLYA+GRTTG+VL +GDGVSH+VPIYEG+A+ H+I+R D
Sbjct: 158 LFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTD 205
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 419 HPVLLTEAPLNPKANXEKMTQIMFXTFN 502
HPVLLTEAPLNP+ N EK ++ F TFN
Sbjct: 127 HPVLLTEAPLNPRRNREKAAEVFFETFN 154
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVA+QAV++LYASGRTTG V GDGVSHTVP+Y+GY L HA R+D
Sbjct: 2177 MYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRID 2224
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +2
Query: 368 KIWHHTXYNELRVAPEXHPVLLTEAPLNPKANXEKMTQIMFXTFN 502
K+W H +++LRV E PVLLTEAPLNPK N E+M Q+MF +FN
Sbjct: 2130 KMWEHA-FDQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFN 2173
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +2
Query: 269 DSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLL 433
D ++GDEA T K+PI H IV +WD M + W + LR PE H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 562 TGIVLXSGDGVSHTVPI 612
TG V+ SGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 111 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLI 740
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +1
Query: 526 QAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
Q LSLYASG T G+ L SG + IYEG+ L H + L+
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLE 809
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +2
Query: 326 PIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTEAPLNPKANXEKMTQIMFXTFN 502
PI+ G++ +WD KI + ++ HP+L++EA N + EK+T++MF +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYN 61
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = +1
Query: 514 YVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILR 648
++ +VL+ +A+GR+ G+V+ SG + VP+++GY L+ AI+R
Sbjct: 66 FLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVR 110
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 239 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 123
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Frame = +1
Query: 508 PMYVAIQAVLSLYASG-------RT-TGIVLXSGDGVSHTVPIYEGYALRHAI 642
P Y A +AVL+L AS RT TG V+ SGDGV+H +P+ EGY + I
Sbjct: 37 PSY-ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 122 AHLELVKLVRCRCDKMKIKRPAVXANREKQIPIAGRCPCS 3
A L L+KL CRC K +R + + + IP C C+
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCT 1335
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +2
Query: 251 GRMGQKDS---YVGDEAXSXRGIL-TLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEX 418
GR G+ DS VG++ S I L+ P + +VT+++ ++ H ++ L +
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHA-FSHLGINTPG 163
Query: 419 ---HPVLLTEAPLNP 454
HPV++TE NP
Sbjct: 164 GVNHPVIMTEPVCNP 178
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 275 YVGDEAXSXRGILTLKY--PIEHGIVTNWDDMXKIWHHTXYNE 397
++GD+ + L Y P + G + NWD +IW +T E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 129 EVAALVVDNGSGMCKAGFAGDDAPRAV 209
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 110 LVKLVRCRCDKMKIKRPAVXANREKQIPIAGRCPC 6
L++L C C+K + KR + + Q+P C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQC 654
>SB_11892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 486 CSXHSTXPHVRRHPSRALAVRVRSYHRYRAGLRRR 590
CS HS P + HP + +++R YH L RR
Sbjct: 1 CSLHSIGP-IPLHPKTSTRIQMRLYHAVGRNLTRR 34
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 629 SAYPS*MGTVWETPSPEXSTIPVVRPDAYSESTAW 525
S +P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -1
Query: 638 AWRSAYPS*MGTVWETPSPEXSTIPVVRPDAYSESTAW 525
+W P T W +PSP+ T P ++T+W
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 638 AWRSAYPS*MGTVWETPSPEXSTIPVVRPDAYSESTAW 525
+W S P T W +PSP+ T P ++T+W
Sbjct: 77 SWTSPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSW 114
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 214 GNTARGASSPAKPALHIPEPLSTT 143
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,774,060
Number of Sequences: 59808
Number of extensions: 477789
Number of successful extensions: 1349
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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