Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30072
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 165 2e-41
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 165 2e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 164 6e-41
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 100 8e-22
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 100 8e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 100 2e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 100 2e-21
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 99 3e-21
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 6e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 79 2e-15
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.077
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.077
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.9 bits (223), Expect = 9e-20
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 97.9 bits (233), Expect = 6e-21
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.9 bits (223), Expect = 9e-20
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 4 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 63
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 64 EAPLNPKANREKMTQIMFETFN 85
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 89 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 136
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 34 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 93
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 94 EAPLNPKANREKMTQIMFETFN 115
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 119 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 166
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 171 KAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMV 32
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 75/82 (91%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 108 EAPLNPKANREKMTQIMFETFN 129
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTG+VL SGDGV+HTVPIYEGYAL HAILRLD
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 164 bits (398), Expect = 6e-41
Identities = 73/82 (89%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KIWHHT YNELR+APE HPVLLT
Sbjct: 47 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLT 106
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPK+N EKMTQIMF TFN
Sbjct: 107 EAPLNPKSNREKMTQIMFETFN 128
Score = 94.3 bits (224), Expect = 7e-20
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +3
Query: 123 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
Score = 87.8 bits (208), Expect = 6e-18
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYV IQAVLSLYASGRTTGIVL +GDGV+HTVPIYEGYAL HAI RLD
Sbjct: 132 MYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLD 179
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 80.6 bits (190), Expect = 9e-16
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKI 373
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 8e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 80.6 bits (190), Expect = 9e-16
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKI 373
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 80.6 bits (190), Expect = 9e-16
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKI 373
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM KI
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 77.4 bits (182), Expect = 8e-15
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDM 364
MGQKDSYVGDEA S RGILTLKYPIEHGIVTNWDDM
Sbjct: 48 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 98.7 bits (235), Expect = 3e-21
Identities = 41/79 (51%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 DSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHT-XYNELRVAPEXHPVLLTEAP 445
D ++G +A S RG+ +++YP+EHGIV NW DM KIW + ++L++ PE HPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 446 LNPKANXEKMTQIMFXTFN 502
LNP N E+ +I F TFN
Sbjct: 114 LNPLKNRERSAEIFFETFN 132
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/48 (66%), Positives = 43/48 (89%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
+Y+ +QAVLSLYA+GRTTG+VL SGDGV+H VPI +G+A++HAI R+D
Sbjct: 136 LYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMD 183
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 251
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVM 47
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 245 RDGRMGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNE-LRVAPEXH 421
R G + KD VG+E R +L + YP+++GIV NWDDM +W HT E L + P+
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 422 PVLLTEAPLNPKANXEKMTQIMFXTF 499
+LLTE PLNP +N EKM Q+MF +
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQY 131
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
+YVA+QAVL+LYA G TG+V+ SGDGV+H P+YEG+AL H RLD
Sbjct: 136 IYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLD 183
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/79 (48%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 269 DSYVGDEAXSXRGI-LTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTEAP 445
D ++GDEA S T+KYPI HGIV +WD M + W + LR PE H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 446 LNPKANXEKMTQIMFXTFN 502
LN N E +IMF +FN
Sbjct: 124 LNTPENREYTAEIMFESFN 142
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 8/52 (15%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRT--------TGIVLXSGDGVSHTVPIYEGYALRHAI 642
+Y+A+QAVL+L AS + TG+V+ SGDGV+H +P+ +GY + I
Sbjct: 146 LYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCI 197
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 117 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +2
Query: 329 IEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTEAPLNPKANXEKMTQIMFXTF 499
++ G++ +W+ KI H+ N L P HPVL +E+ N +A EK+T+IMF F
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKF 150
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +1
Query: 499 QXAPMYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILR 648
Q Y++ VLS +A GRT G+++ SG + VP+++GYA+ HA+++
Sbjct: 151 QVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVK 200
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.077
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 QKDSYVGDEAXSXRGILTLKY--PIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
+K +V E +L Y PIE G V NWD +IW T + + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKT-FGSMDVEASTSRIALT 97
Query: 437 EAPLNPKANXEKMTQIMFXTF 499
+ A + ++I+F F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.077
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 QKDSYVGDEAXSXRGILTLKY--PIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
+K +V E +L Y PIE G V NWD +IW T + + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKT-FGSMDVEASTSRIALT 97
Query: 437 EAPLNPKANXEKMTQIMFXTF 499
+ A + ++I+F F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 526 QAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAI 642
Q L LYA TTG+V+ G+ V + VP+ +GY + AI
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAI 347
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 171 KAGFAGDDAPRAVFPSIVGRPRHQG 245
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 196 ASSPAKPALHIPEPLSTTNAATSS 125
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,270,197
Number of Sequences: 27780
Number of extensions: 320311
Number of successful extensions: 1122
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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