Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30072
(656 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 163 1e-40
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 163 1e-40
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 162 2e-40
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 162 2e-40
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 162 2e-40
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 162 2e-40
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 159 1e-39
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 159 1e-39
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 159 1e-39
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 144 3e-35
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 136 9e-33
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 133 9e-32
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 89 3e-18
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 76 2e-14
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 63 1e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 60 2e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 42 3e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 42 3e-04
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 35 0.041
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 35 0.041
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 33 0.17
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 33 0.17
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 33 0.17
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 30 1.2
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 30 1.6
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 29 2.7
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 2.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 6.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 6.3
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 6.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.3
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 163 bits (395), Expect = 1e-40
Identities = 73/82 (89%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKD+YVGDEA S RGILTLKYPIEHGIV+NWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEGYAL HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 163 bits (395), Expect = 1e-40
Identities = 73/82 (89%), Positives = 75/82 (91%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKD+YVGDEA S RGILTLKYPIEHGIV+NWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEGYAL HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 162 bits (394), Expect = 2e-40
Identities = 73/82 (89%), Positives = 74/82 (90%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKD+YVGDEA S RGILTLKYPIEHGIV NWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEGYAL HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 162 bits (394), Expect = 2e-40
Identities = 73/82 (89%), Positives = 74/82 (90%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKD+YVGDEA S RGILTLKYPIEHGIV NWDDM KIWHHT YNELRVAPE HPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEGYAL HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 162 bits (393), Expect = 2e-40
Identities = 72/82 (87%), Positives = 74/82 (90%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKD+YVGDEA S RGILTLKYPIEHGIV NWDDM KIWHHT YNELRVAPE HP+LLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEGYAL HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 162 bits (393), Expect = 2e-40
Identities = 72/82 (87%), Positives = 74/82 (90%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
MGQKD+YVGDEA S RGILTLKYPIEHGIV NWDDM KIWHHT YNELRVAPE HP+LLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEGYAL HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV 47
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 159 bits (387), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
M QKD+YVGDEA S RGILTLKYPIEHG+V+NWDDM KIWHHT YNELR+APE HPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEG++L HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLD 181
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 159 bits (387), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
M QKD+YVGDEA S RGILTLKYPIEHG+V+NWDDM KIWHHT YNELR+APE HPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEG++L HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLD 181
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 159 bits (387), Expect = 1e-39
Identities = 70/82 (85%), Positives = 74/82 (90%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
M QKD+YVGDEA S RGILTLKYPIEHG+V+NWDDM KIWHHT YNELR+APE HPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 437 EAPLNPKANXEKMTQIMFXTFN 502
EAPLNPKAN EKMTQIMF TFN
Sbjct: 109 EAPLNPKANREKMTQIMFETFN 130
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYVAIQAVLSLYASGRTTGIVL SGDGVSHTVPIYEG++L HAILRLD
Sbjct: 134 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLD 181
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMV 47
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 144 bits (350), Expect = 3e-35
Identities = 61/81 (75%), Positives = 71/81 (87%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
M +KD++VGDEA + RGIL+LKYPIEHG+V+NWDDM KIWHHT YNELR+ PE HP+LLT
Sbjct: 50 MDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLT 109
Query: 437 EAPLNPKANXEKMTQIMFXTF 499
EAPLNPK N EKMTQIMF +F
Sbjct: 110 EAPLNPKVNREKMTQIMFESF 130
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MY+ IQAVLSLY+SGRTTGIVL SGDGVSHTVPIYEGYAL HAILRLD
Sbjct: 135 MYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 182
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRR 269
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMV D +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 136 bits (330), Expect = 9e-33
Identities = 59/81 (72%), Positives = 69/81 (85%)
Frame = +2
Query: 257 MGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLT 436
M + D +VGD+A + GILTL YP+EHG+V+NWDDM KIW+HT Y+ELRVAPE HPVLLT
Sbjct: 4 MNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLT 63
Query: 437 EAPLNPKANXEKMTQIMFXTF 499
EAPLNPKA+ EKMTQIMF TF
Sbjct: 64 EAPLNPKADREKMTQIMFETF 84
Score = 77.8 bits (183), Expect = 6e-15
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MY+ +QA LSL+ASGRTTG VL SGDGVS+ VPIYEG AL HAILRLD
Sbjct: 89 MYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLD 136
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 133 bits (322), Expect = 9e-32
Identities = 61/86 (70%), Positives = 69/86 (80%)
Frame = +2
Query: 245 RDGRMGQKDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHP 424
RDG + +SYVG+E + R ILTLK P+EHGIV NWDDM KIWH+T YNELRV PE HP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 425 VLLTEAPLNPKANXEKMTQIMFXTFN 502
VLLTEAP NPKAN EKMTQIMF +F+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFD 119
Score = 78.2 bits (184), Expect = 4e-15
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
MYV++Q+VL LY+SGRTTG+VL G+ VSHTVP+YEGYAL H ILRLD
Sbjct: 123 MYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLD 170
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 236
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +2
Query: 266 KDSYVGDEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTEAP 445
KD VG+ R L + YP+ +GIV NWDDM +W H YNEL++ P +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 446 LNPKANXEKMTQIMFXTFN 502
LNP N EKM + MF +N
Sbjct: 111 LNPSKNREKMIETMFEKYN 129
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +1
Query: 505 APMYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAILRLD 654
A +++ IQAVL+LYA G TG+V+ SGDGV+H VP+ +GY+ H R++
Sbjct: 131 AGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMN 180
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 269 DSYVGDEAXSX-RGILT--LKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTE 439
D Y+GDEA + R T L YPIEHG V +WD M + W +N LR PE H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 440 APLNPKANXEKMTQIMFXTFN 502
+PL P + E +I+F TFN
Sbjct: 127 SPLTPPESREYTGEILFETFN 147
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRT-----TGIVLXSGDGVSHTVPIYEGYALRHAI 642
+Y+A+ +VL+L A T TG+V+ GDG +H VP+ EGY + I
Sbjct: 151 LYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCI 199
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 138 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 224
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +2
Query: 275 YVGDEAXSXR-GILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTEAPLN 451
YVG +A S R + + PI+ GIV++WD + IW H + L + P HP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 452 PKANXEKMTQIMFXTF 499
+ EK ++MF +
Sbjct: 136 TQQQREKAAELMFEKY 151
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 227
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +1
Query: 511 MYVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRHAIL 645
+++A VL+ +A+GR T +V+ G G + P+++GY L+ A++
Sbjct: 156 LFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVV 200
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 248 DGRMGQKDSYVGDEAXSXR-GILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHP 424
D G++ Y G +A + R + + P + GIVT+WD + +W H N L + P HP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 425 VLLTEAPLNPKANXEK 472
+LL E PLN + EK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 227
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 242
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 419 HPVLLTEAPLNPKANXEKMTQIMFXTF 499
HP+L+TE NP + KM +++F T+
Sbjct: 117 HPILITECACNPVQSRSKMAELLFETY 143
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 326 PIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTEAPL-NPKANXEKMTQIMFXTFN 502
PIE G++ +WD M + + Y L +L PL PKA E++ Q+MF TFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 514 YVAIQAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALRH 636
Y + QAVLSLYA GR +G + G G P+ EG A++H
Sbjct: 121 YASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEG-AVQH 160
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 138 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 230
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 317 LKYPIEHGIVTNWDDMXKIWHHTXYNELRVAPEXHPVLLTEAPLNPKANXEKMTQIMFXT 496
++ PI+ G + N D +IW H + L +AP +LLTEAPL+ + +++F
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 497 F 499
F
Sbjct: 121 F 121
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 141 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 233
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 568 IVLXSGDGVSHTVPIYEGYALRHAILRLD 654
+V+ G +H VP+ + L HAI R+D
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRID 183
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 526 QAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALR 633
QAVL+LYA+ RT+GIV+ G V +PI G +R
Sbjct: 239 QAVLALYAARRTSGIVVNIGFQVITILPILHGKVMR 274
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 526 QAVLSLYASGRTTGIVLXSGDGVSHTVPIYEGYALR 633
QAVL+LYA+ RT+GIV+ G V +PI G +R
Sbjct: 239 QAVLALYAARRTSGIVVNIGFQVITILPILHGKVMR 274
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 498 STXPHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPR 638
S P RR PSR+L+ R RSY R R+ +RRR R+ R R+P R
Sbjct: 115 SRSPRRRRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKR 157
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 498 STXPHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPR 638
S P RR PSR+L+ R RSY R R+ +RRR R+ R R+P R
Sbjct: 126 SRSPRRRRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKR 168
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 498 STXPHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPR 638
S P RR PSR+L+ R RSY R R+ +RRR R+ R R+P R
Sbjct: 156 SRSPRRRRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKR 198
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -2
Query: 235 RGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 125
RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 298 RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 290 PHLLHKSPSVPYDHHALMAGPSHDRGEHGARSIISCETGL 171
P + HK PS+ +D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 126 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVW 260
E++ A + + G G+C A +D + V I GR +GV+ W
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVVSEW 676
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 256 TTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATS 128
TT+TP LP + T +SP P ++ P P TT+ TS
Sbjct: 29 TTVTPPPTALPPVTAETPSPIASPPVP-VNEPTPAPTTSPTTS 70
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 284 DEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAP 412
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 284 DEAXSXRGILTLKYPIEHGIVTNWDDMXKIWHHTXYNELRVAP 412
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 561 HRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 653
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 238 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 116
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,692,861
Number of Sequences: 28952
Number of extensions: 306470
Number of successful extensions: 853
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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