Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30071
         (413 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   1.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   2.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.3  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   6.3  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 190 RGPPESPLQESLPA 149
           RGPP +PLQ  L A
Sbjct: 58  RGPPRTPLQPKLVA 71


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 290 YEYLPWIQNTIEP 328
           Y+ +PW+QN +EP
Sbjct: 97  YDAIPWLQN-VEP 108


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +2

Query: 290 YEYLPWIQN 316
           Y+Y PW+Q+
Sbjct: 491 YDYRPWVQH 499


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 317 YFVSMAGIHKHLCKXQVYRSGTLFG 243
           +F+SM G+H+ +    V     +FG
Sbjct: 7   FFLSMMGVHQDIQDKVVQELYDIFG 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,839
Number of Sequences: 336
Number of extensions: 1723
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)