Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30071
         (413 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    48   4e-06
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    36   0.012
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    33   0.082
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    32   0.14 
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    31   0.25 
Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical pr...    26   9.4  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = +3

Query: 132 MCAGGEAGK-DSCKGDSGGPLMYEHSKKYEAVGIVSFGPEKCARSIYLXFTQMFMNTCHG 308
           +CAG   GK DSC+GDSGGPLM      +E  G+VS+G   CAR        ++ N  H 
Sbjct: 225 LCAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVVSWG-IGCARP---GMPGVYGNV-HS 279

Query: 309 YKIQLNLEMS 338
               +NLEM+
Sbjct: 280 ASTWINLEMN 289


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 35.9 bits (79), Expect = 0.012
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 123 KGXMCAGG-EAGKDSCKGDSGGPLMYEHSK-KYEAVGIVSFGPEKCAR 260
           +   CAG  E G DSC+GDSGGP         +   G++S+G + CA+
Sbjct: 193 RSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWG-DGCAQ 239


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 33.1 bits (72), Expect = 0.082
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +3

Query: 162 SCKGDSGGPLMYEHSKKYEA--VGIVSFGPEKCARSIYLXFTQ--MFMNTCHGY 311
           +C GDSGG L Y       A  + I SFG   C  ++   FT+  M++N    Y
Sbjct: 234 TCHGDSGGGLEYRDDNYGRAFLIAITSFGTRGCPSNMLARFTRVDMYLNLICNY 287


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 269 PGVYTNVYEYLPWIQNTI 322
           PGVYT + +Y+PWIQ  I
Sbjct: 265 PGVYTRISKYVPWIQGVI 282



 Score = 31.5 bits (68), Expect = 0.25
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 132 MCAGGEAGKDSCKGDSGGPLMYEHSK-KYEAVGIVSFGPE 248
           +CAG      +  GDSGGPL+   S  +Y  +GI S+G +
Sbjct: 215 ICAGAYL-HGTAPGDSGGPLLIHKSNGEYVQIGITSYGAD 253


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 0.25
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 135 CAGGEAGKDSCKGDSGGPLMYEHSKKYE--AVGIVSFGPEKCARSI 266
           C   E  K+ C GDSGG L +  S       + IVS+G + C + I
Sbjct: 260 CTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSD-CVQLI 304


>Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical
           protein C33D3.3 protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 172 PLQESLPASPPAHXC 128
           P+Q  LP++PP H C
Sbjct: 120 PVQNKLPSTPPEHVC 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,349,974
Number of Sequences: 27780
Number of extensions: 155836
Number of successful extensions: 454
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)