Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30071
         (413 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    40   1e-05
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   3.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   5.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.5  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   9.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 39.5 bits (88), Expect = 1e-05
 Identities = 18/41 (43%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
 Frame = +3

Query: 132 MCAGGEAGKDSCKGDSGGPLMYEH--SKKYEAVGIVSFGPE 248
           MCA  + GKD+C+ DSGGP+++++  +K+   +GI+S+G E
Sbjct: 335 MCAYAK-GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAE 374


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
 Frame = -2

Query: 298 VFINICVNXRYIDLAHFSGPKLTIPTASYFLECSYIR--GPPESPLQESLPASPPAHXCP 125
           V  N C   RY     F G ++  P  +   +C Y+    P +  L+     SP  +  P
Sbjct: 94  VLPNSCYQERYEYFPGFPGEEMWNPNTNISEDCLYLNIWVPQKYRLRHKGDGSPGGNGGP 153

Query: 124 FHNVI 110
            + ++
Sbjct: 154 RNGLL 158


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
 Frame = -2

Query: 298 VFINICVNXRYIDLAHFSGPKLTIPTASYFLECSYIR--GPPESPLQESLPASPPAHXCP 125
           V  N C   RY     F G ++  P  +   +C Y+    P +  L+     SP  +  P
Sbjct: 94  VLPNSCYQERYEYFPGFPGEEMWNPNTNISEDCLYLNIWVPQKYRLRHKGDGSPGGNGGP 153

Query: 124 FHNVI 110
            + ++
Sbjct: 154 RNGLL 158


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 310 YPWQVFINICVNXRYI 263
           YPWQ  + IC    Y+
Sbjct: 98  YPWQWGLGICKLRAYV 113


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 190 RGPPESPLQESLPASPP 140
           RG P +P Q   P  PP
Sbjct: 36  RGSPPNPSQGPPPGGPP 52


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 351 AVILRSSQGSIVFCIHGRY 295
           A I+  + GSIVF I  RY
Sbjct: 334 AAIVLGAIGSIVFYIISRY 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,555
Number of Sequences: 438
Number of extensions: 1838
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)