Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30069
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    64   1e-12
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   3.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 63.7 bits (148), Expect = 1e-12
 Identities = 28/72 (38%), Positives = 44/72 (61%)
 Frame = +1

Query: 13  MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
           +DD L+  +T+ EH E L++V  + ++  +  N EKS+    EVK+LG I +  G+K DP
Sbjct: 458 IDDLLVASETLNEHLEHLRQVFEKLKQARMTINLEKSNFIQKEVKFLGHILTINGIKADP 517

Query: 193 SKVKAICEMPIP 228
            K+ AI   P+P
Sbjct: 518 EKISAIRNFPVP 529



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
           ++AS SL   + NY   EK LL  +    KF   +   +I + TDH+ L
Sbjct: 629 AFASRSLRGPELNYTTTEKELLGVIFALHKFRIYIQVTKIIIRTDHQAL 677


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 438 FLYWYHIIPTLDYLL*TA*FYKIQPVFLIKSNHYF 334
           + Y+  II T+  L     +Y + P+F +   +YF
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYF 149


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 483 ILHDNQPIAMPQ 518
           ILHD QP+  PQ
Sbjct: 105 ILHDTQPMCNPQ 116


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = -2

Query: 317 KKTVFFRQMRYERTKIIDHTHNLCNSLTQVGIGISQIALTFEGSTLTPS*LKISPKYLTS 138
           K T  ++Q+RYE  ++   +  + N+++ + I      L F    L  S +KI    L +
Sbjct: 136 KNTALWKQLRYEHYRLYQLSVLIDNNMSYIIIVSFATNLYFIIIQLFGS-MKIVKGTLKT 194

Query: 137 VQHIEDFSLL 108
             ++  F+LL
Sbjct: 195 AYYLISFALL 204


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 400 SVINSLIL*NSACFSNKIQSLF 335
           SVI +L L N  CF++ +  +F
Sbjct: 171 SVIMTLALGNPYCFNSSVYKVF 192


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 199  VKAICEMPIPTCVNELQRLWVWSII 273
            +KAI  M +  C+   + +W+ S+I
Sbjct: 1154 IKAIIIMILSGCIIFTEGIWICSLI 1178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,603
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)