Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30069
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 71 1e-12
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 66 5e-11
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 62 5e-10
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 62 8e-10
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 61 1e-09
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 61 1e-09
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 61 1e-09
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 61 1e-09
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 61 1e-09
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 61 1e-09
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 60 3e-09
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 59 5e-09
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 59 6e-09
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 58 8e-09
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 58 8e-09
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 58 8e-09
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 57 2e-08
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 55 1e-07
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 54 2e-07
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 53 4e-07
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 52 9e-07
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 51 1e-06
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 48 8e-06
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 46 3e-05
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 45 1e-04
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 45 1e-04
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 43 3e-04
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 43 3e-04
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 43 3e-04
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 40 0.003
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 38 0.016
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 36 0.048
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 36 0.048
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 71.3 bits (167), Expect = 1e-12
Identities = 35/82 (42%), Positives = 52/82 (63%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD ++F + H + L+ VL + N++ N EKS T+V++LG I + +G+K
Sbjct: 279 VYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKA 338
Query: 187 DPSKVKAICEMPIPTCVNELQR 252
DP KV+AI EMP PT V EL+R
Sbjct: 339 DPKKVRAISEMPPPTSVKELKR 360
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGR-QINVETDHKPL 652
+Y S SL K+++NYA IEK +L+ + +YG I V TDH+PL
Sbjct: 462 AYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPL 511
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 65.7 bits (153), Expect = 5e-11
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +++ ++ EH +L+KV + RE N+K +K E ++LG I + +G+K
Sbjct: 351 VYLDDIIVYSTSLEEHIMSLRKVFLKLREANLKLQLDKCEFLKKETEFLGHIITTDGIKP 410
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
+P+K+KA+ PIP E++
Sbjct: 411 NPAKIKAVVNFPIPKSTKEIK 431
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 509 YASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
YAS +L + + NY+ IEK LL+ V F ++GR+ + +DH+PL
Sbjct: 521 YASRTLNEHEVNYSAIEKELLAIVWATKYFRSYLFGRKFEIHSDHRPL 568
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPI 506
F K+K+ IT P+L D K +L+ DAS A+GAV+ +++PI
Sbjct: 475 FEKLKVLITSDPILIHPDFKKSFSLTTDASNFAIGAVLSQEHKPI 519
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 62.5 bits (145), Expect = 5e-10
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF ++ EH ++Q V + + N+K +K E +LG I + +G+K
Sbjct: 362 VYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKP 421
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
+P KVKAI PIPT E++
Sbjct: 422 NPIKVKAIVSYPIPTKDKEIR 442
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
S+ S +L + NY+ IEK LL+ V F + GRQ + +DH+PL
Sbjct: 531 SFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPL 579
Score = 37.1 bits (82), Expect = 0.021
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 VAKIMGMVNYLSPFIPHXXXXXXXXXXXXXXXX--DWILLEKQAEFYKIKLFITDSPVLG 416
+ +G+ Y FIP+ D LE F K+K I P+L
Sbjct: 441 IRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQ 500
Query: 417 *YDTNKEITLSFDASKDAMGAVILHDNQPIA 509
D K+ L+ DAS A+GAV+ + PI+
Sbjct: 501 LPDFEKKFVLTTDASNLALGAVLSQNGHPIS 531
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 61.7 bits (143), Expect = 8e-10
Identities = 24/81 (29%), Positives = 49/81 (60%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD ++F ++ EH ++L+ V + + N+K +K E +LG + +++G+K
Sbjct: 325 VYLDDIIVFSTSLEEHLQSLEAVFEKLSQANLKLQLDKCEFLRQETTFLGHVITKDGIKP 384
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
+P K+KAI + P+P+ E++
Sbjct: 385 NPEKIKAIQDYPLPSKPKEIK 405
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
SY S +L + + NY+ IEK LL+ V F + GR + +DH+PL
Sbjct: 494 SYISRTLNEHEVNYSAIEKELLAIVWATKTFRHYLLGRHCEIASDHQPL 542
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPIA 509
F K+KL I++ P+L + ++ L+ DAS A+GAV+ D PI+
Sbjct: 449 FQKLKLLISEDPILKIPNFERKFVLTTDASNVALGAVLSQDGHPIS 494
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + VL + N++ ++EK+ V+YLG I S++G K
Sbjct: 318 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKS 377
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
DP KVKAI E P P CV +++
Sbjct: 378 DPEKVKAIQEYPEPDCVYKVR 398
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + +QNYA E+ LL+ V K +YG R+IN+ TDH+PL
Sbjct: 501 SRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPL 547
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + VL + N++ ++EK+ V+YLG I S++G K
Sbjct: 313 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKS 372
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
DP KVKAI E P P CV +++
Sbjct: 373 DPEKVKAIQEYPEPDCVYKVR 393
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + +QNYA E+ LL+ V K +YG R+IN+ TDH+PL
Sbjct: 496 SRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPL 542
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
F +++ + V+ Y D K L+ DAS +GAV+ + +PI M
Sbjct: 447 FQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 494
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + VL + N++ ++EK+ V+YLG I S++G K
Sbjct: 348 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKS 407
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
DP KVKAI E P P CV +++
Sbjct: 408 DPEKVKAIQEYPEPDCVYKVR 428
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + +QNYA E+ LL+ V K +YG R+IN+ TDH+PL
Sbjct: 531 SRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPL 577
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
F +++ + V+ Y D K L+ DAS +GAV+ + +PI M
Sbjct: 482 FQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 529
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + VL + N++ ++EK+ V+YLG I S++G K
Sbjct: 313 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKS 372
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
DP KVKAI E P P CV +++
Sbjct: 373 DPEKVKAIQEYPEPDCVYKVR 393
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + +QNYA E+ LL+ V K +YG R+IN+ TDH+PL
Sbjct: 496 SRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPL 542
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
F +++ + V+ Y D K L+ DAS +GAV+ + +PI M
Sbjct: 447 FQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 494
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + VL + N++ ++EK+ V+YLG I S++G K
Sbjct: 313 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKS 372
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
DP KVKAI E P P CV +++
Sbjct: 373 DPEKVKAIQEYPEPDCVYKVR 393
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + +QNYA E+ LL+ V K +YG R+IN+ TDH+PL
Sbjct: 496 SRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPL 542
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
F +++ + V+ Y D K L+ DAS +GAV+ + +PI M
Sbjct: 447 FQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 494
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + VL + N++ ++EK+ V+YLG I S++G K
Sbjct: 766 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKS 825
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
DP KVKAI E P P CV +++
Sbjct: 826 DPEKVKAIQEYPEPDCVYKVR 846
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + +QNYA E+ LL+ V K +YG R+IN+ TDH+PL
Sbjct: 949 SRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPL 995
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
F +++ + V+ Y D K L+ DAS +GAV+ + +PI M
Sbjct: 900 FQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 947
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/81 (30%), Positives = 46/81 (56%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +++ + EH +L+KV + R+ N+K +K E ++LG I + G+K
Sbjct: 436 VYLDDIIVYSTPLEEHILSLKKVFEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKP 495
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
+P+K KAI P+P +++
Sbjct: 496 NPNKTKAITNFPLPKTPKQIK 516
Score = 45.2 bits (102), Expect = 8e-05
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +2
Query: 509 YASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
YAS +L + + NYA IEK LL+ V F ++GR V +DHKPL
Sbjct: 606 YASRTLNEHEINYATIEKELLAIVWATKYFRSYLFGRPFEVLSDHKPL 653
Score = 38.3 bits (85), Expect = 0.009
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPI 506
F K+K+ IT P+L D +K +L+ DAS A+GAV+ +++P+
Sbjct: 560 FEKLKVLITSDPILIYPDFSKPFSLTTDASNVAIGAVLSQNHKPV 604
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 59.3 bits (137), Expect = 5e-09
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF ++ EH L+ + R R N K KS E ++LG I SQEGV+
Sbjct: 358 VYLDDIIIFSTSLQEHFIHLKTIFGRLRSANFKVQLTKSYFLRRETEFLGHIVSQEGVRP 417
Query: 187 DPSKVKAICEMPIP 228
+P+K++AI P P
Sbjct: 418 NPNKIEAIKNFPCP 431
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 509 YASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+AS +L+ ++ NY+ IEK +L+ + F ++GR+ + TDHKPL
Sbjct: 532 FASRTLSAAETNYSTIEKEMLAIIWAVQYFRPYLFGRRFTIITDHKPL 579
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 357 EKQAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVI----LHDNQPI 506
E + F K +++ P+L D K TL+ DAS A+GAV+ +H ++P+
Sbjct: 477 EFKKAFEYCKTLLSNDPILQYPDFTKPFTLTTDASNFAIGAVLSQGPVHSDRPV 530
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 58.8 bits (136), Expect = 6e-09
Identities = 25/81 (30%), Positives = 47/81 (58%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD ++F ++ EH ++L V + + N+K +K E +LG + + +G+K
Sbjct: 363 VYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKP 422
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
+P K++AI + PIPT E++
Sbjct: 423 NPEKIEAIQKYPIPTKPKEIK 443
Score = 42.3 bits (95), Expect = 6e-04
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 VAKIMGMVNYLSPFIPHXXXXXXXXXXXXXXXX--DWILLEKQAEFYKIKLFITDSPVLG 416
+ +G+ Y FIP+ D E + F K+K I++ P+L
Sbjct: 442 IKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILK 501
Query: 417 *YDTNKEITLSFDASKDAMGAVILHDNQPIA 509
D K+ TL+ DAS A+GAV+ D P++
Sbjct: 502 VPDFTKKFTLTTDASDVALGAVLSQDGHPLS 532
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
SY S +L + + NY+ IEK LL+ V F + GR + +DH+PL
Sbjct: 532 SYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 58.4 bits (135), Expect = 8e-09
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + VL + N++ ++EK+ V+YLG I S++G
Sbjct: 348 VYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFTESVEYLGFIVSKDGTIS 407
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
DP KVKAI E P P CV +++
Sbjct: 408 DPEKVKAIQEYPEPDCVYKVR 428
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + +QNYA E+ LL+ V K +YG R+IN+ TDH+PL
Sbjct: 531 SRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPL 577
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
F +++ + V+ Y D K L+ DAS +GAV+ + +PI M
Sbjct: 482 FQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 529
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 58.4 bits (135), Expect = 8e-09
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +1
Query: 13 MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
+DD +IF ++ +H ++ V + R N K KS E+++LG I +Q+GVK +P
Sbjct: 474 LDDIIIFSPSLQKHLLDIKMVFEKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDGVKPNP 533
Query: 193 SKVKAICEMPIPT 231
+K+ AI + P PT
Sbjct: 534 NKISAIKKFPCPT 546
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +2
Query: 509 YASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+AS +L+ ++ NY+ IEK +L+ + F +YG + + TDHKPL
Sbjct: 645 FASRTLSDTEVNYSTIEKEMLAIIWAVKYFRPYIYGVKFTIVTDHKPL 692
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 58.4 bits (135), Expect = 8e-09
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V MDD LIF K I EH L + + + N+K +K E+++LG + EG+K
Sbjct: 288 VYMDDILIFSKNIGEHVNHLSCIFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKP 347
Query: 187 DPSKVKAICEMPIPT 231
K+ AIC++ +PT
Sbjct: 348 SQKKIDAICKINLPT 362
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
SYAS SL + NY+ IEK LL+ F +YGR+ ++TDH+PL
Sbjct: 457 SYASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPL 505
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPIA 509
F K+K+ IT P++ D NK+ T+ DAS A+GAV++ DN+ I+
Sbjct: 412 FQKLKILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKVIS 457
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/81 (30%), Positives = 46/81 (56%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
+ +DD +IF K H + L + ++ N+K +K +V++LG + S +G++
Sbjct: 351 IYIDDIIIFSKDDETHYQNLDTIFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGIET 410
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
P+KV+AI + PIP + EL+
Sbjct: 411 SPTKVQAISDFPIPRTLKELR 431
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGR-QINVETDHKPL 652
S+ S +L+K+++NYA EK +L+ + K +YG+ ++ + TDH+PL
Sbjct: 531 SFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPL 580
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIA 509
F K+K + V+ Y D KE L+ DAS A+GAV+ +N+PI+
Sbjct: 485 FKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENRPIS 531
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 54.8 bits (126), Expect = 1e-07
Identities = 24/81 (29%), Positives = 45/81 (55%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD ++F ++ EH ++L+ V N+K +K + +LG + S EG++
Sbjct: 310 VYLDDIIVFSASLEEHLQSLRAVFQALSNANLKLQLDKCEFLKHDTYFLGHMVSPEGIRP 369
Query: 187 DPSKVKAICEMPIPTCVNELQ 249
+P K++AI P+PT E++
Sbjct: 370 NPEKLRAIENYPLPTKPKEIK 390
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
SY S +L + NY+ IEK LL+ V F + GR + +DH+PL
Sbjct: 479 SYISRTLNDHETNYSTIEKELLAIVWATKTFRHYLLGRHFEIASDHQPL 527
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPIA 509
F ++KL I++ P+L D K+ L+ DAS A+GAV+ D PI+
Sbjct: 434 FKRLKLLISNDPILRSPDFKKKFVLTTDASNVALGAVLSQDGHPIS 479
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +1
Query: 1 VKVMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGV 180
V V MDD L+ + I EH E L+++ R E ++ +K + +KYLG I +++G+
Sbjct: 866 VVVYMDDILLATENINEHLETLKEIFKRLVENKLELRIDKCEFMQSSIKYLGFIINKDGI 925
Query: 181 KVDPSKVKAICEMPIPTCVNELQ 249
+ ++AI PIP V+ +Q
Sbjct: 926 MPNDKGIEAIKNFPIPNNVHTVQ 948
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 357 EKQAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQ 500
E+ F +K + SPVL Y+ E L DAS GAV++ +
Sbjct: 986 EEMICFNMLKDKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQKKE 1033
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 52.8 bits (121), Expect = 4e-07
Identities = 34/100 (34%), Positives = 50/100 (50%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF + +H + + VL + N++ + EKS V +LG I + G
Sbjct: 315 VYVDDVIIFSEDENDHVKHVDWVLKSLYDANMRISAEKSRFFKKSVSFLGFIVTNNGAAT 374
Query: 187 DPSKVKAICEMPIPTCVNELQRLWVWSIILVLSYLICLKK 306
DP KVKAI E P P V E++ S + + SY C K
Sbjct: 375 DPEKVKAIKEFPEPKNVFEVR-----SFLGLASYYRCFIK 409
Score = 36.3 bits (80), Expect = 0.036
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L+ + NYA E+ LL+ V K +Y ++IN+ TDH+PL
Sbjct: 498 SRTLSDREVNYATNERELLAIVWALAKLRHYLYAVKEINIFTDHQPL 544
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 360 KQAEFYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
+Q F K++ + V+ Y D K L+ DAS +GAV+ + +PI M
Sbjct: 445 QQRAFEKLRNILASEDVILRYPDYKKAFDLTTDASAYGIGAVLSQEGRPITM 496
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 51.6 bits (118), Expect = 9e-07
Identities = 29/75 (38%), Positives = 42/75 (56%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD +IF I +H + VL+R N++ +KEKS V+YLG + S G+
Sbjct: 344 VYVDDVIIFSNGIEDHVNDVAWVLDRLSGANMRVSKEKSFFFKESVEYLGFMVSSGGITT 403
Query: 187 DPSKVKAICEMPIPT 231
PSKV+AI + PT
Sbjct: 404 SPSKVEAIQKYNQPT 418
Score = 31.9 bits (69), Expect = 0.78
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 515 SASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYG-RQINVETDHKPL 652
S +L + N+A E+ LL+ V +YG + +N+ TDH+PL
Sbjct: 527 SRTLQDRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQPL 573
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 357 EKQAE-FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIAM 512
E+Q F K+K + V+ Y D K L+ DAS +GAV+ D +P+ M
Sbjct: 472 ERQCSAFEKLKNVLVSENVMLLYPDYRKAFDLTTDASAFGLGAVLSQDGKPVTM 525
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +1
Query: 7 VMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKV 186
V +DD ++F ++ +H ++ V + + N+K K S E+ +LG I +QEGVK
Sbjct: 340 VYLDDIIVFSPSLQKHIADIKSVFTKLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGVKP 399
Query: 187 DPSKVKAI 210
+P K++ I
Sbjct: 400 NPLKIQTI 407
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 48.4 bits (110), Expect = 8e-06
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +1
Query: 31 FGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDPSKVKAI 210
F K H + L + ++ N+K +K +V++LG + S +G++ P+KV+AI
Sbjct: 203 FSKDDETHYQNLDTIFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGIETSPTKVQAI 262
Query: 211 CEMPIPTCVNELQ 249
+ PIP + EL+
Sbjct: 263 SDFPIPRTLKELR 275
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGR-QINVETDHKPL 652
S+ S +L+K+++NYA EK +L+ + K +YG+ ++ + TDH+PL
Sbjct: 375 SFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPL 424
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 372 FYKIKLFITDSPVLG*Y-DTNKEITLSFDASKDAMGAVILHDNQPIA 509
F K+K + V+ Y D KE L+ DAS A+GAV+ +N+PI+
Sbjct: 329 FKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENRPIS 375
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 13 MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
MDD ++ G + + L V R+ N+K + +K S +EV +LG + +G+ D
Sbjct: 367 MDDLIVIGCSEKHMTKNLTNVFELCRKNNLKLHPDKCSFFMSEVTFLGHKCTDKGILPDD 426
Query: 193 SKVKAICEMPIPTCVNELQR 252
+K AI P+PT + +R
Sbjct: 427 TKYDAIQRYPVPTDADSARR 446
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+YAS S TK + N + E+ L + F +YGR V+TDH+PL
Sbjct: 537 AYASRSFTKGESNKSTTEQELSAIHWAINHFKPYIYGRHFTVKTDHRPL 585
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 363 QAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPIAMP 515
Q F +K + + +L D +KE + DASK+A GAV+ + I +P
Sbjct: 485 QHAFEHLKKQLMNPTLLKYPDFSKEFCIITDASKEACGAVLTQNYNGIHLP 535
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 44.8 bits (101), Expect = 1e-04
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 13 MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
MDD ++ G + + L +V + RE N+K + EK S EV +LG + +G+ D
Sbjct: 473 MDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDD 532
Query: 193 SKVKAICEMPIPTCVNELQR 252
K I P+P + +R
Sbjct: 533 KKYDVIQNYPVPHDADSARR 552
Score = 42.3 bits (95), Expect = 6e-04
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+YAS + TK + N + E+ L + I F +YG+ V+TDH+PL
Sbjct: 643 AYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPL 691
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 357 EKQAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPIAMP 515
E Q F +K + + +L D +KE ++ DASK A GAV+ ++ +P
Sbjct: 589 ECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLP 641
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 44.8 bits (101), Expect = 1e-04
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 13 MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
MDD ++ G + + L +V + RE N+K + EK S EV +LG + +G+ D
Sbjct: 236 MDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDD 295
Query: 193 SKVKAICEMPIPTCVNELQR 252
K I P+P + +R
Sbjct: 296 KKYDVIQNYPVPHDADSARR 315
Score = 42.3 bits (95), Expect = 6e-04
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+YAS + TK + N + E+ L + I F +YG+ V+TDH+PL
Sbjct: 406 AYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPL 454
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 357 EKQAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPIAMP 515
E Q F +K + + +L D +KE ++ DASK A GAV+ ++ +P
Sbjct: 352 ECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLP 404
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +1
Query: 13 MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
MDD ++ G + + L V R N+K + K S EV YLG + +G+ D
Sbjct: 228 MDDLVVIGCSEKHMLKNLTNVFELCRRHNLKLHPGKCSFFMKEVTYLGHKCTDKGILPDD 287
Query: 193 SKVKAICEMPIPTCVNELQR 252
+K + I + PIPT + +R
Sbjct: 288 TKYEVIEKYPIPTDADSARR 307
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+YAS T+ + N + E+ L + F +YG+ V++DH+PL
Sbjct: 398 AYASRMFTQGESNKSTTEQELTAIHWAINHFRPYIYGKHFMVKSDHRPL 446
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 423 DTNKEITLSFDASKDAMGAVILHDNQPIAMP 515
D KE ++ DASK A GAV+ D+ +P
Sbjct: 366 DFGKEFCITTDASKQACGAVLTQDHNGQQLP 396
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +1
Query: 13 MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
MDD ++ G + + L V N R+ N+K + EK S EV +LG + +GV D
Sbjct: 62 MDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDD 121
Query: 193 SKVKAICEMPIPTCVNELQR 252
K I P+P + +R
Sbjct: 122 KKYDVIKNYPVPHDADSARR 141
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+YAS S TK + N + E+ L + F +YG+ ++TDH+PL
Sbjct: 232 AYASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPL 280
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 357 EKQAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILHDNQPIAMP 515
E Q F +K + +L D KE + DASK A GAV+ + I +P
Sbjct: 178 ECQNAFEYLKENLMHPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGIQLP 230
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +1
Query: 13 MDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGVKVDP 192
MDD ++ G + + L V N R+ N+K + EK S EV +LG + +GV D
Sbjct: 62 MDDLMVIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDD 121
Query: 193 SKVKAICEMPIPTCVNELQR 252
K I P+P + +R
Sbjct: 122 KKYDVIKNYPVPHDADSARR 141
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+YAS S TK + N + E+ L + F +YG+ ++TDH+PL
Sbjct: 232 AYASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPL 280
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 506 SYASASLTKSQQNYAQIEKXLLSXVXGCIKFHQCVYGRQINVETDHKPL 652
+YAS S TK + N + E+ L + F VYGR V++DH+PL
Sbjct: 30 AYASRSFTKGESNKSTTEQELAAIHWAINHFRPYVYGRHFLVQSDHRPL 78
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 37.5 bits (83), Expect = 0.016
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 1 VKVMMDDFLIFGKTI*EHNEALQKVLNRARELNIKFNKEKSSICCTEVKYLGDIFSQEGV 180
V V MDD ++ T E L+ VLN + FN K S T V+YLG +
Sbjct: 595 VIVYMDDIMVVSPTKELALERLKTVLNVLTKAGFTFNLAKCSFLKTTVQYLGYEVRAGEI 654
Query: 181 KVDPSKVKAICEMPIPTCVNELQR 252
+ + K+ ++ +P P V+ +++
Sbjct: 655 RPNVRKIASLSSLPPPQTVSGVRQ 678
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 378 KIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVILH 491
K+ +T+ P L +D I L DAS GA++LH
Sbjct: 722 KVVTILTNEPALVIFDPQYPIELHTDASACGYGAILLH 759
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 35.9 bits (79), Expect = 0.048
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 360 KQAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVIL 488
+Q K+K + + PVL Y E L DASKD +GAV+L
Sbjct: 759 EQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLL 801
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 35.9 bits (79), Expect = 0.048
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 360 KQAEFYKIKLFITDSPVLG*YDTNKEITLSFDASKDAMGAVIL 488
+Q K+K + + PVL Y E L DASKD +GAV+L
Sbjct: 453 EQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLL 495
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,201,357
Number of Sequences: 53049
Number of extensions: 451001
Number of successful extensions: 1088
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -