Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30068
(763 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 175 3e-44
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 4e-44
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 4e-44
SB_56| Best HMM Match : Actin (HMM E-Value=0) 175 4e-44
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 6e-36
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 138 3e-33
SB_54| Best HMM Match : Actin (HMM E-Value=0) 138 3e-33
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 115 5e-26
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 8e-26
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 109 2e-24
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 84 1e-16
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 72 4e-13
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 48 8e-06
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 35 0.063
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 35 0.083
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.11
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.33
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 32 0.44
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.44
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.44
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.58
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.77
SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7) 31 1.0
SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016) 31 1.0
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 31 1.0
SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24) 31 1.4
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 31 1.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.8
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.8
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.4
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.4
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 30 2.4
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 3.1
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 4.1
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 5.5
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 5.5
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 5.5
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013) 29 5.5
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_40776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 7.2
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 7.2
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 7.2
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 7.2
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 9.5
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 9.5
SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 9.5
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 9.5
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 9.5
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 9.5
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 9.5
SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2) 28 9.5
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 28 9.5
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 9.5
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 175 bits (426), Expect = 3e-44
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
L+GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKS 240
Query: 430 YELPDGQVITIGNERFRCPEALFQPS 507
YELPDGQVITIGNERFRCPEA+FQPS
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPS 266
Score = 173 bits (421), Expect = 1e-43
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 2 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 181
APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Query: 182 DGVSHTVPIYEGYALPHAILRLDL 253
DGV+HTVPIYEGYALPHAILRLDL
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDL 181
Score = 128 bits (310), Expect = 4e-30
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = +3
Query: 483 PRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 662
P LGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEI 318
Query: 663 TALAPSTMKIKIIA 704
+ALAP TMKIKIIA
Sbjct: 319 SALAPPTMKIKIIA 332
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 707 PERKYSVWIGGSIFASLS 760
PERKYSVWIGGSI ASLS
Sbjct: 334 PERKYSVWIGGSILASLS 351
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 175 bits (425), Expect = 4e-44
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
L+GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKS
Sbjct: 143 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKS 202
Query: 430 YELPDGQVITIGNERFRCPEALFQPS 507
YELPDGQVITIGNERFRCPEA+FQPS
Sbjct: 203 YELPDGQVITIGNERFRCPEAMFQPS 228
Score = 130 bits (314), Expect = 1e-30
Identities = 62/74 (83%), Positives = 64/74 (86%)
Frame = +3
Query: 483 PRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 662
P LGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 221 PEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 280
Query: 663 TALAPSTMKIKIIA 704
+ALAP TMKIKIIA
Sbjct: 281 SALAPPTMKIKIIA 294
Score = 123 bits (297), Expect = 1e-28
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = +2
Query: 56 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 235
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 236 ILRLDL 253
I+RLDL
Sbjct: 138 IIRLDL 143
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 707 PERKYSVWIGGSIFASLS 760
PERKYSVWIGGSI ASLS
Sbjct: 296 PERKYSVWIGGSILASLS 313
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 175 bits (425), Expect = 4e-44
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
L+GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKS 240
Query: 430 YELPDGQVITIGNERFRCPEALFQPS 507
YELPDGQVITIGNERFRCPEA+FQPS
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPS 266
Score = 172 bits (419), Expect = 2e-43
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +2
Query: 2 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 181
APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Query: 182 DGVSHTVPIYEGYALPHAILRLDL 253
DGV+HTVPIYEGYALPHAI+RLDL
Sbjct: 158 DGVTHTVPIYEGYALPHAIIRLDL 181
Score = 129 bits (311), Expect = 3e-30
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = +3
Query: 483 PRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 662
P LGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEI 318
Query: 663 TALAPSTMKIKIIA 704
T+LAP TMKIKIIA
Sbjct: 319 TSLAPPTMKIKIIA 332
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 707 PERKYSVWIGGSIFASLS 760
PERKYSVWIGGSI ASLS
Sbjct: 334 PERKYSVWIGGSILASLS 351
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 175 bits (425), Expect = 4e-44
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
L+GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKS
Sbjct: 180 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKS 239
Query: 430 YELPDGQVITIGNERFRCPEALFQPS 507
YELPDGQVITIGNERFRCPEA+FQPS
Sbjct: 240 YELPDGQVITIGNERFRCPEAMFQPS 265
Score = 173 bits (421), Expect = 1e-43
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 2 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 181
APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 97 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Query: 182 DGVSHTVPIYEGYALPHAILRLDL 253
DGV+HTVPIYEGYALPHAILRLDL
Sbjct: 157 DGVTHTVPIYEGYALPHAILRLDL 180
Score = 129 bits (311), Expect = 3e-30
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = +3
Query: 483 PRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 662
P LGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI
Sbjct: 258 PEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEI 317
Query: 663 TALAPSTMKIKIIA 704
T+LAP TMKIKIIA
Sbjct: 318 TSLAPPTMKIKIIA 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 707 PERKYSVWIGGSIFASLS 760
PERKYSVWIGGSI ASLS
Sbjct: 333 PERKYSVWIGGSILASLS 350
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 173 bits (421), Expect = 1e-43
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 2 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 181
APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 97 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156
Query: 182 DGVSHTVPIYEGYALPHAILRLDL 253
DGV+HTVPIYEGYALPHAILRLDL
Sbjct: 157 DGVTHTVPIYEGYALPHAILRLDL 180
Score = 172 bits (418), Expect = 3e-43
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
L+GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKS
Sbjct: 180 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKS 239
Query: 430 YELPDGQVITIGNERFRCPEALFQPS 507
YELPDGQVITIGNERFRCPEA+FQPS
Sbjct: 240 YELPDGQVITIGNERFRCPEAMFQPS 265
Score = 127 bits (306), Expect = 1e-29
Identities = 60/74 (81%), Positives = 64/74 (86%)
Frame = +3
Query: 483 PRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 662
P LGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI
Sbjct: 258 PEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEI 317
Query: 663 TALAPSTMKIKIIA 704
+ALAP TMKIKIIA
Sbjct: 318 SALAPPTMKIKIIA 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 707 PERKYSVWIGGSIFASLS 760
PERKYSVWIGGSI ASLS
Sbjct: 333 PERKYSVWIGGSILASLS 350
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 148 bits (358), Expect = 6e-36
Identities = 71/76 (93%), Positives = 74/76 (97%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 181
APEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157
Query: 182 DGVSHTVPIYE--GYA 223
DGVSHTVPIYE GY+
Sbjct: 158 DGVSHTVPIYEERGYS 173
Score = 146 bits (353), Expect = 2e-35
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +1
Query: 262 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 441
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELP
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELP 217
Query: 442 DGQVITIGNERFRCPEALFQPS 507
DGQVITIGNERFRCPEAL QPS
Sbjct: 218 DGQVITIGNERFRCPEALLQPS 239
Score = 131 bits (317), Expect = 5e-31
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = +3
Query: 483 PRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 662
P L LGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI
Sbjct: 232 PEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEI 291
Query: 663 TALAPSTMKIKIIA 704
+ALAPSTMKIKIIA
Sbjct: 292 SALAPSTMKIKIIA 305
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 707 PERKYSVWIGGSIFASLS 760
PERKYSVWIGGSI ASLS
Sbjct: 307 PERKYSVWIGGSILASLS 324
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 138 bits (335), Expect = 3e-33
Identities = 57/81 (70%), Positives = 75/81 (92%)
Frame = +2
Query: 11 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 190
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 191 SHTVPIYEGYALPHAILRLDL 253
SH+VPIYEG+A+PH+I+R D+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDI 206
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +3
Query: 393 GHRCIQQLPREVLRTSRRSGHHYRKRKIPLPRGSLPTLVLGMEACGIHETTYNSIMKCDV 572
GH E++RT + +++ LP GS I E +I K D+
Sbjct: 223 GHCFHSSSELEIVRTIKEESMESERQQYALPDGS------------IIEVLAFAIQKSDL 270
Query: 573 DIRKDLYANTVLSGGTTMYPG 635
D+R+ LY+N VLSGG+T++ G
Sbjct: 271 DLRRVLYSNIVLSGGSTLFKG 291
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
++GRD++ YL +L + G+ F +++E EIVR IKE+ S S +
Sbjct: 206 IAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE----------------SMESERQQ 249
Query: 430 YELPDGQVITI 462
Y LPDG +I +
Sbjct: 250 YALPDGSIIEV 260
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 138 bits (335), Expect = 3e-33
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +2
Query: 8 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 187
E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LYASGRTTG V D GDG
Sbjct: 2144 EDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDG 2203
Query: 188 VSHTVPIYEGYALPHAILRLDL 253
VSHTVP+Y+GY LPHA R+DL
Sbjct: 2204 VSHTVPVYDGYWLPHATQRIDL 2225
Score = 116 bits (280), Expect = 2e-26
Identities = 52/86 (60%), Positives = 67/86 (77%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
L+GRDLT YL +++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A +S E
Sbjct: 2225 LAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAP 2284
Query: 430 YELPDGQVITIGNERFRCPEALFQPS 507
Y LPDGQ I IG+ERFR E LFQPS
Sbjct: 2285 YMLPDGQSIRIGSERFRAAEPLFQPS 2310
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 507 VLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 614
+LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2311 LLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 115 bits (276), Expect = 5e-26
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +2
Query: 77 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 253
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDL 59
Score = 94.7 bits (225), Expect = 7e-20
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 393
L+GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 59 LAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 114 bits (274), Expect = 8e-26
Identities = 50/83 (60%), Positives = 62/83 (74%)
Frame = +2
Query: 5 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 184
P VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGD
Sbjct: 102 PRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD 161
Query: 185 GVSHTVPIYEGYALPHAILRLDL 253
GV+H P+YEG+ALPH RLD+
Sbjct: 162 GVTHICPVYEGFALPHLTRRLDI 184
Score = 98.7 bits (235), Expect = 5e-21
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 429
++GRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A ++ L +
Sbjct: 184 IAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQ 243
Query: 430 YELPDGQVITIGNERFRCPEALFQP 504
Y LPDG+V+ + ERF PEALFQP
Sbjct: 244 YTLPDGRVVKLSGERFEAPEALFQP 268
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +3
Query: 507 VLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 671
++ +E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 270 LINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQL 324
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 109 bits (263), Expect = 2e-24
Identities = 51/74 (68%), Positives = 58/74 (78%)
Frame = +3
Query: 483 PRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 662
P LGMEA GIHE YN IMKCDVDIRKDLY+N VLSGG+TM+PGIADRMQKEI
Sbjct: 32 PEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEI 91
Query: 663 TALAPSTMKIKIIA 704
LA ++MK+K+IA
Sbjct: 92 AMLANASMKVKVIA 105
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = +1
Query: 403 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 507
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPA 39
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 707 PERKYSVWIGGSIFASLS 760
PERKYSVWIGGSI ASLS
Sbjct: 107 PERKYSVWIGGSILASLS 124
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/80 (43%), Positives = 57/80 (71%)
Frame = +2
Query: 14 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 193
HP+L++EA N + REK+T++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG +
Sbjct: 34 HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQT 93
Query: 194 HTVPIYEGYALPHAILRLDL 253
VP+++GY L AI+R L
Sbjct: 94 SAVPVHDGYVLQQAIVRSPL 113
Score = 51.2 bits (117), Expect = 9e-07
Identities = 19/64 (29%), Positives = 39/64 (60%)
Frame = +3
Query: 513 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 692
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 693 KIIA 704
K+I+
Sbjct: 206 KLIS 209
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 695 DHCSPERKYSVWIGGSIFASL 757
++ S E++++ WIGGSI ASL
Sbjct: 210 NNSSVEKRFNPWIGGSILASL 230
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTE-RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 426
+ G LT+ L + L + RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K
Sbjct: 810 IGGHHLTENLKQYLRDQRGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTK 869
Query: 427 SYELPDGQVITIGNERFRCPEALFQP 504
Y LPDGQ+I+IG E E LF+P
Sbjct: 870 FYTLPDGQMISIGYECISSMEPLFRP 895
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +2
Query: 122 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 253
Q LSLYASG T G+ L SG + IYEG+ L H + L++
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEI 810
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 531 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 692
+ E N I C +D+R+ LY N VLSGG+TM+ R+Q++I + +K+
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKM 276
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 253
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPI 93
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 250 LSGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT-AASSSSLEK 426
++GRD+T ++ ++L ER E + IKE+ Y+ D +E A + K
Sbjct: 93 IAGRDITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFAKYEQEPAKWIK 152
Query: 427 SYELPDGQVITIGNERFRCPEALFQPSSWVWK 522
YE + I +F E +P+ W+ K
Sbjct: 153 KYESINAVTTKILLRQFAKYEQ--EPAKWIKK 182
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3
Query: 549 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 680
+S++ C +D RK L N VL GGT M PG R+ +EI L S
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQS 107
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 37.1 bits (82), Expect = 0.016
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +3
Query: 465 KRKIPLPRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTV-----LSGGTTMY 629
KR+I L +G+ P V + + TY + +K + + K Y NTV LS GT Y
Sbjct: 647 KRQISLSKGTYPNTV--KRQISLSKGTYQNTVKRQISLSKGTYPNTVKRQISLSKGT--Y 702
Query: 630 PGIADRMQKEITALAPSTMKIKIIALQRGSTP 725
P R P+T+K + I+L +G+ P
Sbjct: 703 PNTVKRQISLSKGTYPNTVK-RQISLSKGTYP 733
Score = 33.5 bits (73), Expect = 0.19
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +3
Query: 465 KRKIPLPRGSLPTLVLGMEACGIHETTYNSIMKCDVDIRKDLYANTV-----LSGGTTMY 629
KR+I L +G+ P V + E TY + +K + + + Y NTV LS GT Y
Sbjct: 587 KRQINLSKGTYPNTV--KRQISLLEGTYQNTVKRQISLLEGTYPNTVKRQISLSKGT--Y 642
Query: 630 PGIADRMQKEITALAPSTMKIKIIALQRGS 719
P R P+T+K + I+L +G+
Sbjct: 643 PNTVKRQISLSKGTYPNTVK-RQISLSKGT 671
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 5 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 169
P +H V++T +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 525 PVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.063
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 81 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 242
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSC 170
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.7 bits (76), Expect = 0.083
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +2
Query: 62 EKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 223
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 224 LPHAILR 244
+ A+ R
Sbjct: 379 IKKAVRR 385
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 325 EREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 444
E ++ +KE CYV+ F ++M A +++ + Y LPD
Sbjct: 392 ETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 102 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 239
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 90 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 203
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 105 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 203
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.19
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 90 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 239
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 81 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTPS 239
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 87 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 239
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 236
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 84 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 239
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +3
Query: 84 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
S STR ++PS P + T P P TP+T S T PST T S TPS
Sbjct: 644 STPSTRSTPSTPSTPSTPST-PSTPS----TPSTPSLTHTPSTPSTPS-TPS 689
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +3
Query: 105 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 230
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 81 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 203
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 105 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 203
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 96 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 239
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 93 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 233
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 96 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 233
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 96 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 239
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 93 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 239
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 197
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +1
Query: 265 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 444
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 445 GQVITIGNERFRCP 486
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +3
Query: 90 HSTRPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*RSRP 266
H+ +P T P R T+P P + T PT P T H+ P ++P
Sbjct: 107 HTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKP 166
Query: 267 HRL-PH-EDPHRAR 302
H PH PH +
Sbjct: 167 HTTKPHTTKPHTTK 180
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 90 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 236
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 158 TGIVLDSGDGVSHTVPI 208
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 111 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/100 (24%), Positives = 37/100 (37%)
Frame = +1
Query: 46 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 225
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 226 PPRHPASGLSGRDLTDYLMKILTERGYSFTTTAEREIVRD 345
P HP GLS D+ + + G T + D
Sbjct: 248 APDHP-HGLSKHTAPDHTIGLYKRTGPDHTLGVSKRTAPD 286
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/81 (28%), Positives = 30/81 (37%)
Frame = +1
Query: 34 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 213
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 214 RIRTPPRHPASGLSGRDLTDY 276
T P HP G+S R D+
Sbjct: 376 SKSTAPDHP-HGVSKRTAPDH 395
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 99 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 227
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 171 WTPATVSPTPCPSTKDTHSP-TPSCVW--T*RSRPHRLPHEDPHRARLLVHYHRRAGNRS 341
W P PT P+ K T +P TPS V +++PHR HE+ R +H R GN
Sbjct: 918 WAPKIPLPTEPPTEKMTEAPTTPSAVHGEEDKNKPHR-KHEERER------HHGRHGNSK 970
Query: 342 *HQ 350
H+
Sbjct: 971 KHR 973
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 53 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 169
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +3
Query: 132 SRCTRPVVPPVSCWT--PAT-VSPTPCPSTKDTHSPTPSCVWT*RSRPHRLPHED--PHR 296
S + PV+P T PA V+ TP P+T+ + P PSC+ S+ + PHE P R
Sbjct: 156 SHGSHPVIPTECNQTVPPAEPVAETP-PTTQANNDPVPSCMPDASSQAPQPPHEPRRPTR 214
Query: 297 ARLL-VHYHRRAGN 335
AR Y GN
Sbjct: 215 ARTRPKRYEPETGN 228
>SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016)
Length = 702
Score = 31.1 bits (67), Expect = 1.0
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 90 HSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*RSRP 266
HS P +P S+P S+ + P P + SPT + HS +P+ + +S P
Sbjct: 444 HSQSPTVRAPQSEPHSQSSTVRAPQSE---PHSQSPTVRAPQSELHSQSPT-LRAPQSDP 499
Query: 267 H------RLPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHRCIQQLPREV 428
H R PH DPH + + S Q V RS L++ N RC+ L REV
Sbjct: 500 HFQSPTVRAPHSDPH--------FQSPTSNSHFQSSTV--RS-LQSANEKRCLFDLEREV 548
Query: 429 LRTSRRSG 452
R G
Sbjct: 549 DRGKHGPG 556
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +3
Query: 93 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*RSRPHR 272
+T T+P+K S T+PV+ P + P T+ P T P + R++P
Sbjct: 125 TTSTTATTPAKTTSATTKPVMTPTTP-APMTLPPISPIDPPRTQPPPIFPIDPPRTQPPP 183
Query: 273 LPHEDPHRAR 302
+P DP R +
Sbjct: 184 IPPIDPPRTQ 193
>SB_12796| Best HMM Match : Radical_SAM (HMM E-Value=8.9e-24)
Length = 676
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y +R R+H ++ +V+ HP
Sbjct: 428 HPHVYSRVKSNHPHVYSRVRRNHPHVYSRVKSNHPHVYSRVR--RNHPHVYSQVKSNHP 484
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y +R R+H ++ V+ HP
Sbjct: 384 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVR--RNHPHVYSRVKSNHP 440
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ N Y ++ H+ + VRR HP
Sbjct: 395 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVRRNHPHVYSRVKSNHPHV--YSRVRRNHP 451
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y +R R+H ++ V+ HP
Sbjct: 406 HPHVYSRVKSNHPHVYSRVRRNHPHVYSRVKSNHPHVYSRVR--RNHPHVYSRVKSNHP 462
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR N P V S + V R+ N Y ++ H+ + VRR HP
Sbjct: 439 HPHVYSRVRRNHPHVYSRVKSNHPHVYSRVRRNHPHVYSQVKSNHPHV--YSRVRRNHP 495
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR N P V S + V R+ N Y ++ H+ + VRR HP
Sbjct: 417 HPHVYSRVRRNHPHVYSRVKSNHPHVYSRVRRNHPHVYSRVKSNHPHV--YSRVRRNHP 473
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ + H+ + V+ HP
Sbjct: 615 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNQPHV--YSRVKSNHP 671
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 351 HPHVYSRVKSNHPHVYSRVRRNHSHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 407
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 505 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 561
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 516 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 572
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 527 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 583
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 538 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 594
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 549 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 605
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 560 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 616
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 571 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 627
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 582 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 638
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 593 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 649
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V ++ SN Y +R R+H ++ V+ HP
Sbjct: 450 HPHVYSRVKSNHPHVYSRVRRNHPHVYSQVKSNHPHVYSRVR--RNHPHVYSRVKSNHP 506
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 494 HPHVYSRVKSNHPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 550
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP S+ +N P V S + V R+ SN Y +R H+ + V+ HP
Sbjct: 472 HPHVYSQVKSNHPHVYSRVRRNHPHVYSRVKSNHPHVYSRVRSNHPHV--YSRVKSNHP 528
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 657 EITALAPSTMKIKIIALQRGSTPYG 731
++ AL P T+K+K+ A+ + TPYG
Sbjct: 454 QLIALVPKTLKVKVEAVMKIKTPYG 478
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 111 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 215
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 37 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 129
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 90 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 93 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 90 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 93 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 93 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 93 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 117 PSKPCSRCTRPVVPP 161
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 236
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 105 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 203
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 105 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 209
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +3
Query: 114 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*RSRPHRLPHEDPH 293
+PS+ S PV S + T++ P P + DT SPTP T R P P
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTPPLTDTKSPRTPEKPAPLPT 365
Query: 294 R 296
R
Sbjct: 366 R 366
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 76 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 222
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -2
Query: 234 AWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 55
+W P T W +PSP+ T P ++T+W + +S++ +I L
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHIIGRLS 160
Query: 54 ALGLR 40
+ R
Sbjct: 161 GVHYR 165
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -2
Query: 261 ATAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 121
+T + +W S P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSW 114
>SB_53874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ + H+ + V+ HP
Sbjct: 113 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNQPHV--YSRVKSNHP 169
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 3 HPHVYSRVRSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 59
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 14 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 70
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 25 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 81
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 36 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 92
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 47 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 103
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 58 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 114
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 69 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 125
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 80 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 136
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 404 HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRGHP 580
HP SR +N P V S + V R+ SN Y ++ H+ + V+ HP
Sbjct: 91 HPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHVYSRVKSNHPHV--YSRVKSNHP 147
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 414 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 500
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 414 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 500
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 597 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIALQRGSTPY 728
N ++GG TMY R+++E+ A+ P ++ + + G T Y
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRPFQSTFRLHSAE-GYTVY 174
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 356 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 481
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 41 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 169
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 99 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 236
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 111 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 248
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 141 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 245
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 349 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 489
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 87 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 239
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013)
Length = 611
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 468 RKIPLPRGSLPTLVLGME--ACGIHETTYNSIMKCDVDIRKDLYANT 602
RK P + + GM AC + S C +D+R+ LYA T
Sbjct: 319 RKCAYPSDYISAAISGMRFLACQVENLAKMSSCSCTIDLRRALYAMT 365
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 192 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 19
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 18 G 16
G
Sbjct: 147 G 147
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*RSRPHRLP 278
PP +P+ P P PP PA P P P P + PH LP
Sbjct: 57 PPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPP-PLPAPPPPPAQPAPQPPPAPPHFLP 114
>SB_40776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 405 IQQLPREVLRTSRRSGHHYRKRKIPLPRGSLPTLVLGMEA 524
IQQ PR LR Y +RK+ + +PT+ LG A
Sbjct: 466 IQQYPRRKLRVISIGIQQYPRRKLRVISIGIPTISLGQRA 505
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 70 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 237
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 81 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 233
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 91 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIR--TPPRHPASGLS 255
I H++ RH S+ L R R HR + RR + H ++L R R PP + + +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 256 GR 261
G+
Sbjct: 1648 GK 1649
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 450 LTVGKFVRLLEGAAGCSGGHF 388
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 84 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 215
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 87 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 242
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 356 SCATSLLTSSRKWPPL---HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRL 511
SC ++L SR W +PAAP+RS+T+ P R+ +T+ + + S RL
Sbjct: 262 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS-PR-RNGRRKTRKHMDRNASLRARL 314
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 200
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 40 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 219
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 220 RT 225
+T
Sbjct: 707 QT 708
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 102 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 233
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 123 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 242
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 81 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 239
C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 93 STRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPSCVWT*RSRPH 269
S P + S P + +PP TP T + PTP P T +PTP PH
Sbjct: 233 SLLPLIPNTSIPPTPTPHTSIPPTP--TPHTSIPPTPTPHTSIPPTPTPHTSIPPTPTPH 290
Query: 270 RLPHEDPH 293
PH
Sbjct: 291 TSIPPTPH 298
>SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2)
Length = 466
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 356 SCATSLLTSSRKWPPL---HPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRL 511
SC ++L SR W +PAAP+RS+T+ P R+ +T+ + + S RL
Sbjct: 376 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS-PR-RNGRRKTRKHMDRNASLRARL 428
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 177 PATVSPTPCPSTKDTHSPTPSCVWT*RSRPHRLPHE 284
P+ PT C T TPS + T R H L HE
Sbjct: 381 PSLPGPTTCRGESGTGKATPSTMSTNAHRHHPLGHE 416
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 105 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 251
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,151,746
Number of Sequences: 59808
Number of extensions: 676887
Number of successful extensions: 4877
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 4167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4818
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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