Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30068
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             138   5e-35
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.33 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.1  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   9.4  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  138 bits (334), Expect = 5e-35
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +3

Query: 510 LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 689
           LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK
Sbjct: 42  LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 101

Query: 690 IKIIA 704
           IKIIA
Sbjct: 102 IKIIA 106



 Score = 85.4 bits (202), Expect = 5e-19
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +1

Query: 388 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 507
           EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPS 40



 Score = 38.3 bits (85), Expect = 8e-05
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +2

Query: 707 PERKYSVWIGGSIFASLS 760
           PE+KYSVWIGGSI ASLS
Sbjct: 108 PEKKYSVWIGGSILASLS 125


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +2

Query: 395 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRLGYGSLRHPRDHI*LHHEVRRG 574
           PP    +     +  P   S LS T  ++A+ L   PR+    L+  R  I +H+ + RG
Sbjct: 678 PPARSPSSQAQASQCPQTASLLSSTHSTLARSLMEGPRMTAEQLK--RTDI-IHNYIMRG 734


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +3

Query: 549 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIALQRGSTPY 728
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I    +   P 
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPA 400

Query: 729 GSVDRSS 749
            ++ R S
Sbjct: 401 FAIHRDS 407


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +1

Query: 136 AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSGRDLTDYLMKILTERGYSFT 315
           ++  +++HR        C P   +L +I + P HP +  +    T     I T    + T
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPASSTSLPAT-----ITTTTTTTTT 116

Query: 316 TTA 324
           TTA
Sbjct: 117 TTA 119


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 602 RIVRWYHHVPWNRRPYAK 655
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 602 RIVRWYHHVPWNRRPYAK 655
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 196 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 104
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,337
Number of Sequences: 438
Number of extensions: 5492
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)