Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30066
(768 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0381 - 18339290-18339994,18340083-18340103,18341925-183419... 32 0.58
11_06_0012 + 19251085-19251666 31 1.0
08_02_0773 + 21043553-21043813,21044775-21045203 31 1.0
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 31 1.0
05_05_0010 - 21496089-21496487 31 1.3
02_05_0400 + 28671562-28672219,28672365-28672441,28673679-286737... 31 1.3
03_01_0388 + 3018192-3018312,3018969-3019257,3019364-3019676 30 1.8
06_02_0153 - 12319853-12319948,12320277-12320536,12320920-12320977 30 2.3
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 30 2.3
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 30 2.3
01_01_1195 - 9567023-9567789,9567871-9568120 30 2.3
03_06_0080 - 31512792-31513046,31514087-31514202,31514797-315149... 29 3.1
02_03_0279 + 17250347-17252098 29 3.1
01_01_0004 + 15599-15976,16383-16474,16558-17258,17501-17571,179... 29 3.1
12_02_1094 + 26032135-26032164,26032975-26033152,26033234-260340... 29 5.4
06_01_1179 + 10137652-10138038 29 5.4
01_01_0387 + 2999222-2999495,2999834-2999934 29 5.4
11_04_0154 + 14172294-14172459,14172993-14173054,14174781-141748... 28 7.1
09_04_0436 - 17558603-17559265,17559322-17559384 28 7.1
07_01_1106 - 10187609-10190041,10190292-10191932 28 7.1
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 28 7.1
01_01_0471 - 3467275-3467351,3467526-3467895,3468258-3468555,346... 28 7.1
01_01_0291 + 2385464-2385515,2386010-2386071,2386177-2386320,238... 28 7.1
07_03_0160 + 14556622-14556924 28 9.4
06_03_0348 + 19790400-19790870 28 9.4
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 28 9.4
03_05_1150 - 30758981-30759778,30759970-30760729,30760823-307609... 28 9.4
>02_03_0381 -
18339290-18339994,18340083-18340103,18341925-18341982,
18342084-18342220,18342480-18342650
Length = 363
Score = 31.9 bits (69), Expect = 0.58
Identities = 28/80 (35%), Positives = 33/80 (41%)
Frame = -1
Query: 555 SGTPAGRLPPSRMADMAHPPSSPTHRLSWDTALPGCRIWNLDVQPEFSCWGPRVDLSSRR 376
SG PP MA PP RLS D+ PG W +Q F + +S R
Sbjct: 142 SGNYGSGYPPPHQHHMAPPPIHTPSRLSHDS--PGGSPWRSPMQ--F-----QAPMSGYR 192
Query: 375 GAPELVPCLPTTPHPQVFPP 316
G P P P +PH V PP
Sbjct: 193 GPPPGAP-PPWSPHSGVPPP 211
>11_06_0012 + 19251085-19251666
Length = 193
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 485 VGELGGCAISAILLGGRRP-AGVPLVVESRDWQHGVFMGASMRSEATAAAEHSGK 646
VG+LG C +AI+ GG R P + + +W G G R A A A G+
Sbjct: 105 VGDLGSCGGTAIVAGGERLWLPGPRLCLASEWLTGAVAGQRGRWPAGAVASQRGR 159
>08_02_0773 + 21043553-21043813,21044775-21045203
Length = 229
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 401 PGLTFPVDEALRSWSHAFPPHPTLRCFRHVSEHGVFE 291
P L P ++ +R W+H + H T EHG FE
Sbjct: 100 PTLACPSNDGIRFWAHEWEKHGTCAAAALGDEHGYFE 136
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 687 PKNGRIANGSCITILPLCSAAAVASDLMEAPMNTP 583
PK+ + +C +IL LCSAAA AS A N P
Sbjct: 61 PKSFKSYAETCASILRLCSAAAAASGTAAASSNLP 95
>05_05_0010 - 21496089-21496487
Length = 132
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 609 LMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADMAHPPSSP 487
L EA +N P + R T+SG G P R++ + +SP
Sbjct: 12 LQEARVNLPSTRGRGGTSSGVVGGSSSPRRLSSSSSSTASP 52
>02_05_0400 +
28671562-28672219,28672365-28672441,28673679-28673730,
28673851-28674008
Length = 314
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 347 PPHPTLRCFRHVSEHGVFEHRRHCYRIRSG*VPGATPKNP 228
P + T R + H + +H +HCY G PGA P++P
Sbjct: 137 PVYNTSRPLPFLQSHHL-QHHQHCYADTIGVAPGAGPRSP 175
>03_01_0388 + 3018192-3018312,3018969-3019257,3019364-3019676
Length = 240
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -1
Query: 249 WCNSKEPVFRVNGPEYAVLVELHPGYVVPHALYFVPGQCWRHHGKVRF 106
WCN+ P F ++ P + + ++ +VP + + +CWR +G VRF
Sbjct: 105 WCNATRPYFDMSQPAWE-NIGIYSAGIVP--ILYQQVKCWR-YGGVRF 148
>06_02_0153 - 12319853-12319948,12320277-12320536,12320920-12320977
Length = 137
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 187 TSSRLCRPPRTLLCTRAVLASSWQGSFSRKLKEKRQ 80
T+S L P R + RA+ AS W R LK+ RQ
Sbjct: 47 TTSCLASPTRHVAAERAIPASMWPTEVERVLKQHRQ 82
>03_02_0740 - 10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +3
Query: 321 ETPEGGVWWEG-MGPAPERLVDWKGQPWD----PSKKTPAAHPNS 440
E EGG WWEG + + +D+ PW+ K + HP+S
Sbjct: 1176 ELEEGGSWWEGRVSAVKPKSLDFPESPWEKYVIQYKNDGSDHPHS 1220
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Frame = -1
Query: 591 NTPCCQSRDSTTSGTPAGRLPPSRM-ADMAHPPSSPTHRLSWDTALPGCRIWNLDVQPEF 415
N P + P G +PP M MA P PT A PG I N P
Sbjct: 128 NVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPPTSGA-PGAPIPNSGAPPAM 186
Query: 414 SCWGPRVDLSSRRGAPELVPCLPTTPHPQ 328
P GAP V P PQ
Sbjct: 187 YQTNPPQPAGPTSGAPPPVSAPPPAAPPQ 215
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -1
Query: 660 SCITILPLCSAAAVASDLMEAPMNTPCC--QSRD-STTSGTPAGRLP 529
+C T L L S +A A+ A N PCC QS +++S T A R P
Sbjct: 211 TCTTDLSLSSGSAAAAAAAAAAANIPCCFYQSTPRASSSSTAACRAP 257
>03_06_0080 -
31512792-31513046,31514087-31514202,31514797-31514911,
31514997-31515056,31515619-31515688,31515952-31515986,
31516094-31516231,31516369-31516737
Length = 385
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 396 PWDPSKKTPAAHPNSRFCTPAEQCP--MIDGEWESSE 500
PW ++ TP +H + +F P E C ++D +W SE
Sbjct: 149 PW--TQPTPCSHVDLKFPVPPEHCTSGIMDNKWRRSE 183
>02_03_0279 + 17250347-17252098
Length = 583
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 633 SAAAVASDLMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADMAHPPSSPTH 481
S A A+ P++ P + +TT+ T LP R + +A PP P H
Sbjct: 161 STTATATVTAAPPLDEPAAATATTTTTTTTT--LPLPRYSHVASPPPPPVH 209
>01_01_0004 +
15599-15976,16383-16474,16558-17258,17501-17571,
17968-18057,18142-18321,18531-18593
Length = 524
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 589 VHGSFHEVRGHGRRRTQR*NGDARSVCDASVLRLQ 693
+HGSFH+ R RR T N R+ DA V+ ++
Sbjct: 476 LHGSFHKKRKPIRRATSNGNKPKRNPADAGVIDIE 510
>12_02_1094 +
26032135-26032164,26032975-26033152,26033234-26034017,
26034135-26034216,26034968-26035177
Length = 427
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -1
Query: 633 SAAAVASDLMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADMAHPPSSPTHRLSWDTA 460
S+ A A + + S++ + SGTPAG PS ++ + P+SP S +A
Sbjct: 190 SSEAAAVSMRDVGTEMTPMASKEQSRSGTPAGAATPS-LSPLCSVPTSPRGAASASSA 246
>06_01_1179 + 10137652-10138038
Length = 128
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 639 LCSAAAVASDLMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADMAHPPSSPT 484
+ +AAA S +AP +P + ST + TPA + A P ++PT
Sbjct: 12 ILTAAAAISAAAQAPAESPSPKPSKSTAAATPAKAPTVASAPRKAGPAAAPT 63
>01_01_0387 + 2999222-2999495,2999834-2999934
Length = 124
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -2
Query: 356 HAFPPHPTLRCFRHVSEHGVFEHRRHCYRIRSG*VPGATPKN--PFSGLM 213
H +PPH + +HG + + Y G VPGA P N P G M
Sbjct: 46 HGYPPHAGAAHGAYPPQHGAYPPQHGAYP-GHGYVPGAYPSNAAPHGGHM 94
>11_04_0154 +
14172294-14172459,14172993-14173054,14174781-14174859,
14174964-14175164,14175420-14175610
Length = 232
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 597 PMNTPCCQSRDSTTSGTPAGRLPPSRMADMAHPPSSPTHRLSWDTAL 457
PM P R ++ SG P RLPP R+ S HR+ T++
Sbjct: 74 PMQLP---PRGASLSGDPLRRLPPDRLQPPCQAGSVDLHRMPPTTSI 117
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -1
Query: 609 LMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADMAHPP----SSPTHRLSWDTALPGCR 445
L A + C + T PS + A PP ++PT LSW T P C+
Sbjct: 135 LRHAATESQACAGSPAATRPLRLASASPSTTSSSATPPPNASATPTPSLSWRTTPPPCQ 193
>07_01_1106 - 10187609-10190041,10190292-10191932
Length = 1357
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 470 GTLLCRGAESGIWMCSRSFLAGVPGLTFPVDEALRSWSHAFPPHPTLRCFRHVS 309
G LLC A SG+ S++ L+ + L + ALR P H +CF+ S
Sbjct: 747 GNLLCMKALSGLLWHSKTALSEIDSLVGGIVPALRLCYDLLPSH-LKQCFKFCS 799
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 544 GRPSAAQQDGGYGTPSELSHSPSIMGHCSAG 452
G+P A Q YG P +L++ PSI C +G
Sbjct: 610 GKPRACSQGAQYGRPEDLNY-PSIAVPCLSG 639
>01_01_0471 -
3467275-3467351,3467526-3467895,3468258-3468555,
3468680-3469734,3469823-3470467
Length = 814
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 598 SHEHAVLPVPRLDYERYAGRPSAAQQDGGYGTPSELSHSPSIMGH 464
S E A++ + L +R G+P +QD + PS ++ SP + GH
Sbjct: 117 SSERALMAIKPLYAQRQNGQPQNPEQDMSFVIPSTVNVSP-LNGH 160
>01_01_0291 +
2385464-2385515,2386010-2386071,2386177-2386320,
2386496-2386569,2386698-2386752,2386830-2386916,
2386983-2387110,2387211-2387289
Length = 226
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 580 LPVPRLDYERYAGRPSAAQQDGGYGTPSELSHSPSIMGHCSAGVQNL 440
+PV +D + +P++ Q D G PS S S G C AG QN+
Sbjct: 1 MPVRVVDTATPSSQPTSGQ-DANAGHPSPPSCSLLSAGRCYAGTQNV 46
>07_03_0160 + 14556622-14556924
Length = 100
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -3
Query: 214 WPGVRRPCRTSSRLCRPPRTLLCTRAVLASSWQGSFSRKLKEK 86
WP RP TS RP L T AV+ + G K+KEK
Sbjct: 50 WPNHGRPASTSVACGRPASELASTMAVVGNQHMGF---KVKEK 89
>06_03_0348 + 19790400-19790870
Length = 156
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -1
Query: 678 GRIANGSCITILPLCSA---AAVASDLMEAPMNTPCCQSRDSTTSGTPAGRLPP 526
G G + +LP C A ++A P C+S S AGR+PP
Sbjct: 102 GAFQLGETVRLLPACLHLYHAECIDPWLDAHTTCPLCRSDTGDPSPVDAGRIPP 155
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 556 ERYAGRPSAAQQDGGYGTPSELSHSPSIMGHCSAGVQNLEFGC-AAGVFLLGSQG*PFQS 380
E A R + GG G ELS + +G AG+QNL C V + PF +
Sbjct: 68 EGEARRAEKGEVVGG-GLDPELSVARIYLGRIGAGLQNLGNTCYLNSVLQCLTYTEPFAA 126
Query: 379 TRRSGAGPMPSHHTPPSGVSATLVNTVF 296
+SG PS +LV+ +F
Sbjct: 127 YLQSGKHKSSLPSESPSAYEKSLVHKIF 154
>03_05_1150 -
30758981-30759778,30759970-30760729,30760823-30760920,
30761997-30762521
Length = 726
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 325 HLRVGCGGKAWDQLRSASSTGKVNPGTPARKLRLHIQIP 441
H+ + GG W Q RSA S+ A+ +R + Q+P
Sbjct: 398 HVALFHGGDIWRQSRSAMSSAAAKMDVHAKLMRRYKQVP 436
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,481,771
Number of Sequences: 37544
Number of extensions: 735677
Number of successful extensions: 3023
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3017
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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