Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30066
(768 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37396| Best HMM Match : PEPCK (HMM E-Value=0) 164 6e-41
SB_37397| Best HMM Match : PEPCK (HMM E-Value=0) 160 1e-39
SB_3810| Best HMM Match : PEPCK (HMM E-Value=0) 160 1e-39
SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 29 4.1
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 4.1
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 29 4.1
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_11| Best HMM Match : E6 (HMM E-Value=2.2) 29 4.1
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 29 5.5
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_58895| Best HMM Match : SRCR (HMM E-Value=0) 28 7.2
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14) 28 9.5
SB_40247| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_37396| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 549
Score = 164 bits (399), Expect = 6e-41
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +1
Query: 1 ARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDDIAW 180
AR EGWLAEHM+I+G+TNP+GKK YIAAAFPSACGKTNLAM+TPT+PG+K ECVGDDIAW
Sbjct: 116 ARDEGWLAEHMMILGLTNPEGKKIYIAAAFPSACGKTNLAMLTPTIPGWKCECVGDDIAW 175
Query: 181 MKFDKDGVLRAINPENGFFGVAPGT 255
M FDKDG LRAINPE GFFGVAPGT
Sbjct: 176 MWFDKDGTLRAINPECGFFGVAPGT 200
Score = 126 bits (304), Expect = 2e-29
Identities = 57/82 (69%), Positives = 64/82 (78%)
Frame = +2
Query: 500 GCAISAILLGGRRPAGVPLVVESRDWQHGVFMGASMRSEATAAAEHSGKMVMHDPFAMRP 679
G ISAIL GGRRP GVPLV++S +WQHGVF+ S+ SE TAAAE GK VM DPFAMRP
Sbjct: 290 GVPISAILFGGRRPYGVPLVMQSFNWQHGVFLATSLSSETTAAAEFKGKAVMRDPFAMRP 349
Query: 680 FFGYNFGDYLKHWLSMPQPGTK 745
FFGYNFG YL+HWLSM + K
Sbjct: 350 FFGYNFGKYLEHWLSMEKDPKK 371
Score = 100 bits (240), Expect = 1e-21
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 SAATNPIAMATVFKNTVFTNVAETPEGGVWWEGMGPAPE--RLVDWKGQP-WDP-----S 410
S +NPIAM+T K+T+FTNVA+T +G WWEG+ P + ++ W G P W P +
Sbjct: 201 SFLSNPIAMSTFQKDTIFTNVAKTSDGDFWWEGLNPPADGIKIRSWLGDPDWKPEVAGKT 260
Query: 411 KKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVP 509
+KT AAHPNSRFC P++ CP++D +WE+ GVP
Sbjct: 261 RKT-AAHPNSRFCAPSDHCPIMDKDWENPAGVP 292
>SB_37397| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 613
Score = 160 bits (388), Expect = 1e-39
Identities = 69/85 (81%), Positives = 77/85 (90%)
Frame = +1
Query: 1 ARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDDIAW 180
A EGWLAEHM+I+G+TNP+GKK YIAAAFPSACGKTNLAM+TPT+PG+K ECVGDDI W
Sbjct: 246 AHDEGWLAEHMMIMGLTNPEGKKIYIAAAFPSACGKTNLAMLTPTIPGWKCECVGDDINW 305
Query: 181 MKFDKDGVLRAINPENGFFGVAPGT 255
M FDKDG LRAINPE+GFFGV PGT
Sbjct: 306 MWFDKDGTLRAINPESGFFGVCPGT 330
Score = 124 bits (298), Expect = 1e-28
Identities = 55/82 (67%), Positives = 64/82 (78%)
Frame = +2
Query: 500 GCAISAILLGGRRPAGVPLVVESRDWQHGVFMGASMRSEATAAAEHSGKMVMHDPFAMRP 679
G ISAIL GGRRP GVPLV++S +WQHGVF+ S+ SE TAAAE GK VM DPFAMRP
Sbjct: 411 GVPISAILFGGRRPYGVPLVMQSFNWQHGVFLATSLSSETTAAAEFKGKAVMRDPFAMRP 470
Query: 680 FFGYNFGDYLKHWLSMPQPGTK 745
FFGYNFG YL+HWL++ + K
Sbjct: 471 FFGYNFGKYLEHWLNLSKDPKK 492
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = +3
Query: 243 CTRYSAATNPIAMATVFKNTVFTNVAETPEGGVWWEGMGPAPERLVDWKGQP-WDPSKKT 419
C + +NPIAM T K+T+FTNVA T +G WWE ++ WKG P W P++
Sbjct: 327 CPGTTFTSNPIAMKTFQKDTIFTNVAVTSDGDFWWE----EGIKIRSWKGDPDWKPTENG 382
Query: 420 P-AAHPNSRFCTPAEQCPMIDGEWESSEGVP 509
P AAHPNSRFC P++ CP++D +WE+ GVP
Sbjct: 383 PTAAHPNSRFCAPSDHCPIMDKDWENPAGVP 413
>SB_3810| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 707
Score = 160 bits (388), Expect = 1e-39
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +1
Query: 1 ARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDDIAW 180
A +EGWLAEHMLI+ +TNP+GKK+YIAAAFPSACGKTNLAM+ PT+PG+KV+CVGDDIAW
Sbjct: 430 ALKEGWLAEHMLIMALTNPEGKKKYIAAAFPSACGKTNLAMLKPTIPGWKVDCVGDDIAW 489
Query: 181 MKFDKDGVLRAINPENGFFGVAPGT 255
M FDK G LRAINPE+GFFGVAPGT
Sbjct: 490 MWFDKTGQLRAINPESGFFGVAPGT 514
Score = 124 bits (298), Expect = 1e-28
Identities = 56/83 (67%), Positives = 65/83 (78%)
Frame = +2
Query: 500 GCAISAILLGGRRPAGVPLVVESRDWQHGVFMGASMRSEATAAAEHSGKMVMHDPFAMRP 679
G ISAIL GGRRP GVPLV ++ +WQHGVF+ +S+ SE TAAAE GK +M DPFAMRP
Sbjct: 600 GVPISAILFGGRRPRGVPLVYKAFNWQHGVFIASSLSSETTAAAEFKGKAIMRDPFAMRP 659
Query: 680 FFGYNFGDYLKHWLSMPQPGTKH 748
FFGYN+G YL+HWLSM TKH
Sbjct: 660 FFGYNYGRYLEHWLSMADK-TKH 681
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 SAATNPIAMATVFKNTVFTNVAETPEGGVWWEGMGPAPE--RLVDWKGQP-WDPSKKTPA 425
S TNP A+ T K+T+FTN A T +G WWEG+ P+ + W G+ W P + A
Sbjct: 515 SMKTNPEALKTCLKDTIFTNTAMTSDGDFWWEGLPDPPKGVSITSWLGEENWSPESGSKA 574
Query: 426 AHPNSRFCTPAEQCPMIDGEWESSEGVP 509
AHPNSRFCTP+ C ++D +WE+ EGVP
Sbjct: 575 AHPNSRFCTPSANCEIMDKDWENPEGVP 602
>SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1776
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -3
Query: 544 GRPSAAQQDGGYGTPSELSHSPSIMGHCSAGVQNLEFGCAAGVFLLGSQG*PF-QSTRRS 368
GRP +Q D PS S++ + G +A + +FG ++ +L+ SQG +ST
Sbjct: 557 GRPGTSQVDVSNNHPSMTSYA--LFGSAAASPWSQDFGTSSEYWLMASQGQHVSESTLVR 614
Query: 367 GAGPMPSHHTPPSGVSAT 314
G G + + PS + T
Sbjct: 615 GRGDILISPSYPSALLET 632
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 432 PNSRFCTPAEQCPMIDGEWESSEGVPYPPSC 524
P C AE CP D E S+GV Y C
Sbjct: 14 PKDARCECAESCPTYDDERCGSDGVTYKNDC 44
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +3
Query: 360 PAPERLVDWKGQPWDPSKKTPAAHPNSRFCTPAEQCPMIDGEWESSEGVPYPPSCWAADG 539
P P + WKG P +P A P P P W G P PP + G
Sbjct: 1803 PGPPGAIGWKGNPGNP------AGPPGLDGPPGPPGPQGPKGWPGVPGPPGPPGAYGWKG 1856
Query: 540 RP 545
P
Sbjct: 1857 YP 1858
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 348 EGMGPAPERLVDWKGQPWDPSKKTPAAHPN 437
+ +GP P DW + WD K A H N
Sbjct: 35 DSLGPWPSLTDDWDEESWDLEKAVAAMHRN 64
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 432 PNSRFCTPAEQCPMIDGEWESSEGVPYPPSC 524
P C AE CP D E S+GV Y C
Sbjct: 168 PKDARCECAESCPTYDDERCGSDGVTYKNDC 198
>SB_11| Best HMM Match : E6 (HMM E-Value=2.2)
Length = 485
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 726 IDSQCFR*SPKL*PKNGRIANGSCITILP 640
+ SQC R + P G++ G C++ILP
Sbjct: 331 VPSQCLRAPSQKKPVEGKVEEGQCLSILP 359
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2
Query: 347 PPHPTLRCFRHVSEHGVFEHRRHCYRIRSG*VPGATPKNPFSGLM---ARSTPSLSNFIQ 177
PP T H HG + RRH + + + L+ + STPS S+ +
Sbjct: 916 PPVSTFYHHHHHQHHGHYRRRRHYHHPYYPYYHQPYHHHQYHQLLISSSLSTPSTSSSLL 975
Query: 176 AMSSPTHSTLYPGSV 132
A +SPT + L G+V
Sbjct: 976 ASTSPTINYLSVGTV 990
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.7 bits (61), Expect = 5.5
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Frame = -1
Query: 606 MEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADMAHPPSSPTHRLSWDTAL-PGCRIWNLD 430
++ P NTP + S TP PPSR ++ P + P+ + + L P R N
Sbjct: 57 LKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPPSCQSNTPRPLTPPPRQSNTT 116
Query: 429 VQPEFSCWGPRVDLSSRRGAP--ELVPCLPT------TPHPQVFPPR 313
P + PR + ++ P P PT TP P PPR
Sbjct: 117 QPPAYP---PRQSYALQQTTPLHTSQPLRPTPRRPSDTPQPFTPPPR 160
>SB_58895| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1838
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -2
Query: 479 VYHGTLLCRGAESGIWMCSRSFLAGVPGLTFPVDEALRSWSHAFPPHPTLRCFRHVSEHG 300
+Y L CRG E + C + VPG D + + + P H T R V G
Sbjct: 1383 IYLSALRCRGTEKSLVDCEHTGFHRVPGCDHIDDAGVVCANQSVPKHRT----RLVGGRG 1438
Query: 299 VFEHR 285
+E R
Sbjct: 1439 PYEGR 1443
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 657 CITILPLCSAAAVASDLMEAPMNTPCCQSRDSTTSG 550
CIT+ P S + + L+ M TPCC DS+T+G
Sbjct: 3476 CITMHP--SNQQLFAQLLCNVMETPCCFPGDSSTTG 3509
>SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 334 VGCGGKAWDQLRSASSTG 387
VGCGG A +Q+ +ASSTG
Sbjct: 435 VGCGGYADNQVAAASSTG 452
>SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14)
Length = 505
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 512 IWHTLRALPLTVYHGTLLCRGAESGI 435
+WH + +LP GT++C G + I
Sbjct: 34 VWHEVNSLPKVETEGTVICHGITTDI 59
>SB_40247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 593 MGASMRSEATAAAEHSGKMVMHDPFAMRPFFGYNF 697
M +SM + T A+ S K ++HD + +G NF
Sbjct: 34 MDSSMPNPMTGVADQSAKAILHDMKSRATSYGKNF 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,685,965
Number of Sequences: 59808
Number of extensions: 739285
Number of successful extensions: 3001
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2988
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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