Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30065
         (679 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    95   1e-18
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    95   1e-18
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    95   1e-18
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    95   1e-18
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    64   2e-09
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    64   2e-09
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    55   2e-06
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    50   5e-05
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba...    42   0.014
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    38   0.17 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    38   0.17 
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la...    36   0.91 
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler...    33   6.4  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    33   6.4  
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre...    33   6.4  
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre...    33   8.4  

>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPSQQLR 383
           VLQRRDWENPGVTQLNRLAAHPPFASWRNS EARTDRPSQQLR
Sbjct: 71  VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPSQQLR 383
           VLQRRDWENPGVTQLNRLAAHPPFASWRNS EARTDRPSQQLR
Sbjct: 25  VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPSQQLR 383
           VLQRRDWENPGVTQLNRLAAHPPFASWRNS EARTDRPSQQLR
Sbjct: 29  VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPSQQLR 383
           VLQRRDWENPGVTQLNRLAAHPPFASWRNS EARTDRPSQQLR
Sbjct: 11  VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 256 FYNVVTGKTLALPNLIALQHIPLSPAGVIAXRPAPIALPNS--CAXEWRMA 402
           FYNVVTGKTLALPNLIALQHIPLSPAGVI+   A    P+    + +WRMA
Sbjct: 9   FYNVVTGKTLALPNLIALQHIPLSPAGVIS-EEARTDRPSQQLRSLKWRMA 58


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 252 RVLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPSQQ 377
           ++L RRDWENP +TQ +RL AHPPF SWR+   A+ DRPS Q
Sbjct: 17  QILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 28/43 (65%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPSQQLR 383
           VL R DW N  +T LNRL AHP FASWR+   AR + PS + R
Sbjct: 17  VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPS 371
           +L R DW+NP +T +NRL +H P   WR++  AR   PS
Sbjct: 21  ILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59


>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
           Gammaproteobacteria|Rep: Beta-galactosidase -
           Pseudoalteromonas haloplanktis (Alteromonas
           haloplanktis)
          Length = 1039

 Score = 41.9 bits (94), Expect = 0.014
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTDRPSQQ 377
           ++ RRDWENP   Q+N++ AH P   ++   +AR +  SQ+
Sbjct: 7   IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 38.3 bits (85), Expect = 0.17
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 333 WRNSXEARTDRPSQQLR 383
           WRNS EARTDRPSQQLR
Sbjct: 47  WRNSEEARTDRPSQQLR 63


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 38.3 bits (85), Expect = 0.17
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +2

Query: 185 KKTRGGARYPIRPIVSRIT 241
           ++ RGGARYPIRPIVSRIT
Sbjct: 257 RRPRGGARYPIRPIVSRIT 275


>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
           lactis|Rep: Beta-galactosidase - Lactococcus lactis
           subsp. lactis (Streptococcus lactis)
          Length = 998

 Score = 35.9 bits (79), Expect = 0.91
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPP 323
           VL+R+DWENP V+  NRL  H P
Sbjct: 9   VLERKDWENPVVSNWNRLPMHTP 31


>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
           cholerae|Rep: Beta-galactosidase - Vibrio cholerae
          Length = 56

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 255 VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEARTD 362
           +L  +DW+NP + + +    H P  S+R   EAR D
Sbjct: 7   ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLD 42


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -3

Query: 236 YDSL*GELGTGPPLE 192
           YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292


>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
           n=1; Clostridium cellulolyticum H10|Rep: Glycoside
           hydrolase family 2, TIM barrel - Clostridium
           cellulolyticum H10
          Length = 1033

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 267 RDWENPGVTQLNRLAAHPPFASWRNSXEA 353
           R+WEN  +TQ+NR   H P+ ++ +  +A
Sbjct: 3   REWENQYITQINRYPMHSPYGAYESVEQA 31


>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
           precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
           Glycoside hydrolase family 2, TIM barrel precursor -
           Pseudoalteromonas atlantica (strain T6c / BAA-1087)
          Length = 1079

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +3

Query: 231 VVLQFTGR---VLQRRDWENPGVTQLNRLAAHPPFASWRNSXEART 359
           ++  FTG    V  + DWENP V Q+NRL A     S+    +A T
Sbjct: 17  LLFSFTGSAKTVQVKNDWENPDVIQINRLPARATSYSFDTPEQALT 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,723,118
Number of Sequences: 1657284
Number of extensions: 12558698
Number of successful extensions: 24297
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 23732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24289
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)