Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30065
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   7.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.3  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 44  LTIYFDRLIKFIQHKTSNWFGRSLKTL 124
           L  Y DR + F     +NW   SL  L
Sbjct: 792 LQCYIDRNVVFSSQNNTNWVPTSLNRL 818


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 319 PLSPAGVIAXRPAPIALPNSCA 384
           P  P GV   R  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 550 KSPLLKNVDSNVKGRKTVYQGDGPLRETIT 639
           K PL+  +   ++G K   + DGP   +I+
Sbjct: 872 KYPLINAMRQELEGYKVKLEYDGPYETSIS 901


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 149 FNYFIAIRLMFLVIFRTN*MFYVV 78
           + + I   L+FLVIF  N   ++V
Sbjct: 115 YGFVIVAHLLFLVIFVLNIWCWIV 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,104
Number of Sequences: 336
Number of extensions: 3122
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)