Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30065
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66146-1|AAC51165.1|  592|Homo sapiens CD6e protein.                   31   5.0  
L78838-2|AAL40085.1|  592|Homo sapiens T cell surface glycoprote...    31   5.0  

>U66146-1|AAC51165.1|  592|Homo sapiens CD6e protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 VTGKTLALPNLIALQHIPLS-PAGVIAXRPAPIALPNSCAXEWRMAN 405
           + GK  ALP ++  QH+P + PAG  + +P PI +P   +   R+ +
Sbjct: 426 IKGK-YALPVMVNHQHLPTTIPAGSNSYQPVPITIPKEDSQRHRVTD 471


>L78838-2|AAL40085.1|  592|Homo sapiens T cell surface glycoprotein
           CD6 isoform e protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 VTGKTLALPNLIALQHIPLS-PAGVIAXRPAPIALPNSCAXEWRMAN 405
           + GK  ALP ++  QH+P + PAG  + +P PI +P   +   R+ +
Sbjct: 426 IKGK-YALPVMVNHQHLPTTIPAGSNSYQPVPITIPKEDSQRHRVTD 471


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,750,654
Number of Sequences: 237096
Number of extensions: 2006993
Number of successful extensions: 6731
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6725
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)