Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30064
(736 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181; Eukary... 108 1e-22
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 93 8e-18
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 93 8e-18
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 93 8e-18
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 93 8e-18
UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus M... 76 1e-12
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 73 7e-12
UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2; Methano... 72 2e-11
UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 64 3e-09
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 64 4e-09
UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeb... 61 3e-08
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 60 6e-08
UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella... 60 6e-08
UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5... 60 6e-08
UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8; Euryarc... 60 6e-08
UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12; Archae... 58 2e-07
UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultu... 58 3e-07
UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1; Encephal... 56 9e-07
UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcu... 55 2e-06
UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3; Halobac... 52 1e-05
UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3; Thermop... 52 2e-05
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 51 3e-05
UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3; Methano... 49 1e-04
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2; Sulfolo... 49 1e-04
UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5; Thermop... 48 2e-04
UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3; Euth... 44 0.005
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 42 0.012
UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 42 0.016
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.036
UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1... 40 0.048
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 40 0.063
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.084
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh... 37 0.45
UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n... 36 0.78
UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 1.4
UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n... 35 1.8
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 34 4.2
UniRef50_A5AA88 Cluster: Function: vacuolar protein sorting; n=8... 33 5.5
UniRef50_Q2VT50 Cluster: Beta-galactosidase precursor; n=2; Flav... 33 7.3
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 33 9.6
>UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181;
Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens
(Human)
Length = 194
Score = 108 bits (260), Expect = 1e-22
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 92.7 bits (220), Expect = 8e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 254 KRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 376
+RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 73 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 92.7 bits (220), Expect = 8e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 254 KRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 376
+RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 27 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 92.7 bits (220), Expect = 8e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 254 KRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 376
+RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 31 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 92.7 bits (220), Expect = 8e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 254 KRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 376
+RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 13 QRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53
>UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S4 -
Methanoregula boonei (strain 6A8)
Length = 185
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 187
P K+Y TP+RPFEK R+++E +++ EYGLRNKREVW+ + L + RKAARELL L
Sbjct: 4 PGKNHKSYQTPKRPFEKTRIEEETRLVIEYGLRNKREVWKAQSHLRKYRKAARELLAL 61
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 736 LATFAGFPRQALNRGLPLGFRFSALRHLDPKKL 638
LATFAGFPRQALNRGLPLGFRFSALRHLDPKKL
Sbjct: 40 LATFAGFPRQALNRGLPLGFRFSALRHLDPKKL 72
>UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2;
Methanomicrobiales|Rep: 30S ribosomal protein S4P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 181
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
P K Y TP+RPFE +R+++E +++ EYGLRNKREVW K L + RKAARE++ L+
Sbjct: 4 PGKNHKQYQTPKRPFELSRIEEETRLVIEYGLRNKREVWIAKGALRKYRKAAREIIALQ 62
>UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Thermoplasma
volcanium
Length = 200
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL 178
P K Y TPR P+EK R+D+E KI+ +YGL+NKRE+WR + L+ IR AR L
Sbjct: 4 PKFHHKKYSTPRHPWEKDRIDEENKILVKYGLKNKREIWRSEAMLSSIRSQARYL 58
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2
Query: 257 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 370
RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 21 RRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeba
histolytica|Rep: 40S ribosomal protein S9 - Entamoeba
histolytica
Length = 185
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +2
Query: 26 SKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
S TY TP+ P+E+ R D ELK++G++GL+NK+E+ RV Y L +R A+ +L
Sbjct: 9 SITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVML 60
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = +3
Query: 255 NVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 395
NVVTGKTLALPNLIALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 11 NVVTGKTLALPNLIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
>UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella
natans|Rep: Ribosomal protein S9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 180
Score = 60.1 bits (139), Expect = 6e-08
Identities = 23/53 (43%), Positives = 40/53 (75%)
Frame = +2
Query: 23 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
+SK + P+ P+EK RL E+++I +GL+NKRE+WR ++ L+++RK A +L+
Sbjct: 10 YSKIWNRPKNPYEKLRLCNEIRMINLFGLKNKRELWRTQFFLSKLRKVAEKLI 62
>UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5;
Oryza sativa|Rep: 40S ribosomal protein S9, putative -
Oryza sativa subsp. japonica (Rice)
Length = 157
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2
Query: 23 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL 178
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ L K R +
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQELLTLDEKNPRRI 61
>UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S4P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 219
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEG 193
P SK+Y TPR P+++AR+ E++++ YGLRNK+EVW+ L R AR+LL
Sbjct: 4 PGKKSKSYETPRHPWQEARMAAEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAQVA 63
Query: 194 GPGTQ 208
G +
Sbjct: 64 SGGQE 68
>UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12;
Archaea|Rep: 30S ribosomal protein S4P - Methanococcus
jannaschii
Length = 187
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +2
Query: 23 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT 184
F KTY TP P+ K R+++E ++ +YGLR KREVW+ + L + R+ AR L++
Sbjct: 8 FKKTYETPNHPWIKERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS 61
>UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultured
methanogenic archaeon RC-I|Rep: 30S ribosomal protein
S4P - Uncultured methanogenic archaeon RC-I
Length = 205
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
P K Y TP P++KAR+D+E ++ +YGLRNK+ VW+ L + R AR LL
Sbjct: 4 PGQAKKLYDTPNHPWQKARIDEETSLVKKYGLRNKKSVWKHASDLRKYRSNARALL 59
>UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S9 -
Encephalitozoon cuniculi
Length = 184
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 26 SKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT 184
SK TPR PFEK RL +E +++G YGL+NK E+W ++ A+ ++ AR LLT
Sbjct: 7 SKRASTPRDPFEKERLIREAQLVGVYGLKNKHELWVMEKIFAKDKERARILLT 59
>UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcus
aeolicus Nankai-3|Rep: Ribosomal protein S4 -
Methanococcus aeolicus Nankai-3
Length = 177
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEG 193
P SKTY TP P+ R+ QE ++ +YGL NK+E+W+++ L R+ AR+L++
Sbjct: 4 PRRLSKTYDTPNHPWIGERIKQERELSNKYGLSNKKEIWKMETRLRTFRRQARKLISDTS 63
Query: 194 GPGTQFAL 217
G + A+
Sbjct: 64 AQGEKEAV 71
>UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S4P -
Halobacterium salinarium (Halobacterium halobium)
Length = 170
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 11 VPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
+P +K Y TP P++ R+ +E ++ YGL+NK E+WR + L R+ AR LL
Sbjct: 3 LPGENTKFYETPNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLLGQT 62
Query: 191 G 193
G
Sbjct: 63 G 63
>UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S4P -
Cenarchaeum symbiosum
Length = 205
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 187
P + + + P+RPF +EL+ +G +GLR KRE+W+ L+R+R AR LL L
Sbjct: 4 PKLPRRMWRKPKRPFNYDLKMEELRTLGTFGLRTKRELWKAHTELSRVRNQARSLLAL 61
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 257 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 376
R DW N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 20 REDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 182
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +2
Query: 29 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
K Y TP P+ R+ +E ++ +YGL+NK+E+W+ + + R R+ AR +L ++
Sbjct: 9 KQYDTPSHPWNADRIKEENRLANKYGLKNKKEIWKAESRVKRYRRDARIILGMD 62
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 48.8 bits (111), Expect = 1e-04
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 257 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 364
R DW+NP +T +NRL +H P WR+++ AR PS
Sbjct: 24 RNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2;
Sulfolobaceae|Rep: 30S ribosomal protein S4P -
Sulfolobus tokodaii
Length = 177
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 14 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 187
P + + P P+ + L++E +IG+YGLRNKRE+W + + + R AR LL L
Sbjct: 4 PKKSRRKWEGPGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLAL 61
>UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S4P -
Pyrobaculum aerophilum
Length = 159
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/48 (43%), Positives = 34/48 (70%)
Frame = +2
Query: 44 PRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 187
P++ + K L +EL+++GEYGLRNK+E+W + L I + AR LL++
Sbjct: 16 PKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSM 63
>UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 187
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +2
Query: 23 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
+ KT+ R + K LD ELK IG Y LR KRE+W V+ +LA ++K L+
Sbjct: 119 YGKTFKESRSSYGKGFLDAELKFIGGYELRCKRELWSVQMSLAALQKYFSSLM 171
>UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3;
Eutheria|Rep: Ribosomal subunit protein S9 - Trichechus
manatus latirostris
Length = 30
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +2
Query: 125 VWRVKYTLARIRKAARELLTLE 190
VWRVK+TLA+IRKAARELLTL+
Sbjct: 1 VWRVKFTLAKIRKAARELLTLD 22
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 257 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 370
RRDWENP Q+N++ AH P ++ E+AR + SQ+
Sbjct: 10 RRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Nanoarchaeum
equitans
Length = 180
Score = 41.9 bits (94), Expect = 0.016
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 44 PRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEGGPG 202
P P++K RL E +++ EYGL+NKRE+W + T+AR +A L + G
Sbjct: 11 PSHPWQKQRLIIEKRLMKEYGLKNKRELW-IAETIARKWRAYARYLNAKQAAG 62
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.036
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 326 WRNSEEARTDRPSQQLR 376
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1;
uncultured euryarchaeote ARMAN-2|Rep: Ribosomal protein
small subunit S9 - uncultured euryarchaeote ARMAN-2
Length = 187
Score = 40.3 bits (90), Expect = 0.048
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 29 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT 184
+ Y P+ + AR+ + +I EYGL N E+W+V+ ++R+R R LL+
Sbjct: 9 RKYDKPKDIWNLARIKADNALIAEYGLANMHELWKVQSEISRLRGNVRVLLS 60
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 39.9 bits (89), Expect = 0.063
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 184 PRGGARYPIRPIVSRIT 234
PRGGARYPIRPIVSRIT
Sbjct: 259 PRGGARYPIRPIVSRIT 275
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.084
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -1
Query: 397 FAIRHSXAQLLGRAIGAGLFAITPAGERG 311
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1173
Score = 37.1 bits (82), Expect = 0.45
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 515 YLVYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTI 396
YL+++F L G L +WLKN+ KF++ F ++L L +
Sbjct: 663 YLIFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLAL 702
>UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 09 contig 1, DNA
sequence - Ostreococcus tauri
Length = 293
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1
Query: 133 APYFTLVAETVLSDDLQLLVKACLFKRTTRCHVRL 29
AP +LVA+ L+DDLQL V+A L +RT+R RL
Sbjct: 167 APQLSLVAKAELTDDLQLGVEAILLERTSRLLERL 201
>UniRef50_A6G4K3 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 531
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 243 AVVLNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIAL 362
AVV V+G L LP+L+ PL P G++A++ PIAL
Sbjct: 58 AVVRCTVSGPNLQLPHLVDELATPLPPTGLLARKMDPIAL 97
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.5 bits (78), Expect = 1.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 260 RDWENPGVTQLNRLAAHPPFASWRNSEEA 346
R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000501C59 UniRef100 entry -
Rattus norvegicus
Length = 199
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 122 EVWRVKYTLARIRKAARELLTL 187
EVWRVK+TL +IRKA ELL L
Sbjct: 41 EVWRVKFTLTKIRKAFWELLLL 62
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 257 RRDWENPGVTQLNRLAAHPPFASWRNSEEART 352
+ DWENP V Q+NRL A S+ E+A T
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALT 62
>UniRef50_A5AA88 Cluster: Function: vacuolar protein sorting; n=8;
Eurotiomycetidae|Rep: Function: vacuolar protein sorting
- Aspergillus niger
Length = 1337
Score = 33.5 bits (73), Expect = 5.5
Identities = 28/115 (24%), Positives = 54/115 (46%)
Frame = -1
Query: 577 TLESTFFNSGLLFQTGTTLNPISSILLIYKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQ 398
+++ F GLL + GT+++PI + I P G ++ + LTR++ ++ LQ
Sbjct: 1065 SMDKPRFIHGLLVEAGTSIDPIKLVRRI--------PSGLEIEGLREGLTRMIREH-DLQ 1115
Query: 397 FAIRHSXAQLLGRAIGAGLFAITPAGERGMCCKAIKLGNARVFPVTTFKTTASEL 233
+I A++L + G+ + RG+ ++ R P T TTA+ +
Sbjct: 1116 ASISQGAAKVLQSEVAVGMDTLRRGQRRGIKFNIVE--EERSIPGTPTTTTATAI 1168
>UniRef50_Q2VT50 Cluster: Beta-galactosidase precursor; n=2;
Flavobacterium|Rep: Beta-galactosidase precursor -
Flavobacterium sp. 4214
Length = 1046
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 227 VLQFTGRRFKRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 355
++ F + R DWENP V Q+NR A F + + A D
Sbjct: 18 IIVFAQEKPSRNDWENPEVFQINREPARAAFLPFADEASAIAD 60
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 32.7 bits (71), Expect = 9.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 260 RDWENPGVTQLNRLAAHPPFASWRNSEEARTD 355
+DW+NP + + + H P S+R +EAR D
Sbjct: 11 QDWQNPHIVKWHCRTPHVPLHSYRTEQEARLD 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,154,276
Number of Sequences: 1657284
Number of extensions: 15381775
Number of successful extensions: 35861
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 34760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35854
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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