Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30064
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 108 2e-23
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 108 2e-23
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 108 2e-23
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 102 2e-21
U66146-1|AAC51165.1| 592|Homo sapiens CD6e protein. 33 1.4
L78838-2|AAL40085.1| 592|Homo sapiens T cell surface glycoprote... 33 1.4
AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein. 31 5.7
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 108 bits (260), Expect = 2e-23
Identities = 50/57 (87%), Positives = 55/57 (96%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 108 bits (259), Expect = 2e-23
Identities = 49/54 (90%), Positives = 54/54 (100%)
Frame = +2
Query: 29 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLD 55
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 102 bits (244), Expect = 2e-21
Identities = 48/57 (84%), Positives = 53/57 (92%)
Frame = +2
Query: 20 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 190
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL+
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLD 64
>U66146-1|AAC51165.1| 592|Homo sapiens CD6e protein.
Length = 592
Score = 32.7 bits (71), Expect = 1.4
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 240 LAVVLNVVTGKTLALPNLIALQHIPLS-PAGVIAKRPAPIALPNSCAXEWRMAN 398
+A +L + GK ALP ++ QH+P + PAG + +P PI +P + R+ +
Sbjct: 419 IAFILLRIKGK-YALPVMVNHQHLPTTIPAGSNSYQPVPITIPKEDSQRHRVTD 471
>L78838-2|AAL40085.1| 592|Homo sapiens T cell surface glycoprotein
CD6 isoform e protein.
Length = 592
Score = 32.7 bits (71), Expect = 1.4
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 240 LAVVLNVVTGKTLALPNLIALQHIPLS-PAGVIAKRPAPIALPNSCAXEWRMAN 398
+A +L + GK ALP ++ QH+P + PAG + +P PI +P + R+ +
Sbjct: 419 IAFILLRIKGK-YALPVMVNHQHLPTTIPAGSNSYQPVPITIPKEDSQRHRVTD 471
>AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.
Length = 1857
Score = 30.7 bits (66), Expect = 5.7
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 261 VTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN--SCAXEWRMANCKR*YFV 419
+TGK A +L+ + +P G K P P+A PN + W M+ K Y++
Sbjct: 1762 LTGKVEAEFHLVTAEEAEKNPVGKARKEPEPLAKPNRPDTSFSWFMSPFKCLYYL 1816
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,037,515
Number of Sequences: 237096
Number of extensions: 2333128
Number of successful extensions: 4836
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4836
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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