Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30064
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   124   1e-28
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   124   1e-28
AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   124   1e-28
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   124   1e-28
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   103   3e-22
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro...    31   2.2  
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    29   5.0  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    29   5.0  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    29   5.0  
AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p pro...    29   6.6  
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,...    29   6.6  
AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,...    29   6.6  
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,...    29   6.6  

>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  124 bits (299), Expect = 1e-28
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = +2

Query: 2   NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
           N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 182 TLE 190
           TL+
Sbjct: 63  TLD 65


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  124 bits (299), Expect = 1e-28
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = +2

Query: 2   NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
           N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 182 TLE 190
           TL+
Sbjct: 63  TLD 65


>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  124 bits (299), Expect = 1e-28
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = +2

Query: 2   NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
           N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 182 TLE 190
           TL+
Sbjct: 63  TLD 65


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  124 bits (299), Expect = 1e-28
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = +2

Query: 2   NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
           N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 182 TLE 190
           TL+
Sbjct: 63  TLD 65


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  103 bits (246), Expect = 3e-22
 Identities = 50/63 (79%), Positives = 55/63 (87%)
 Frame = +2

Query: 2   NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
           N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+  R V  VKY LA+IRK ARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARELL 61

Query: 182 TLE 190
           TL+
Sbjct: 62  TLD 64


>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
           protein.
          Length = 1062

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 464 NRPKSAKSLINQKNRRDRVECCSSLEQESTIKERGLQRQRAKNR 595
           +RPK  K  +++  RRDR    S   Q S  ++R  +RQR+K R
Sbjct: 509 HRPKDEKQTLDK--RRDRSTDRSKENQRSNERQRSKERQRSKER 550


>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 264 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 377
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 26  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 264 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 377
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 63  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 264 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 377
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 41  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78


>AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p
           protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 464 NRPKSAKSLINQKNRRDRVECCSSLEQESTIKERGLQRQRAKNR 595
           +RPK  +  +++  RRDR    S   Q S  ++R  +RQR+K R
Sbjct: 152 HRPKDEQQSVDK--RRDRSTDRSKENQRSNERQRSKERQRSKER 193


>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
           isoform A protein.
          Length = 1062

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 464 NRPKSAKSLINQKNRRDRVECCSSLEQESTIKERGLQRQRAKNR 595
           +RPK  +  +++  RRDR    S   Q S  ++R  +RQR+K R
Sbjct: 509 HRPKDEQQSVDK--RRDRSTDRSKENQRSNERQRSKERQRSKER 550


>AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,
           isoform D protein.
          Length = 849

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 464 NRPKSAKSLINQKNRRDRVECCSSLEQESTIKERGLQRQRAKNR 595
           +RPK  +  +++  RRDR    S   Q S  ++R  +RQR+K R
Sbjct: 509 HRPKDEQQSVDK--RRDRSTDRSKENQRSNERQRSKERQRSKER 550


>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
           isoform C protein.
          Length = 1107

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 464 NRPKSAKSLINQKNRRDRVECCSSLEQESTIKERGLQRQRAKNR 595
           +RPK  +  +++  RRDR    S   Q S  ++R  +RQR+K R
Sbjct: 509 HRPKDEQQSVDK--RRDRSTDRSKENQRSNERQRSKERQRSKER 550


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,713,172
Number of Sequences: 53049
Number of extensions: 694600
Number of successful extensions: 1561
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)