Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30061
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.8  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.8  

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 298 GYHCQDRGNLGLLQGAFSNVLRGTG 224
           GY C+ R         F N ++GTG
Sbjct: 376 GYGCEHRWRQIFNMVGFRNAVQGTG 400


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +3

Query: 177 YRTFLISSYKTSTKAPPVPLRTLEKAP*RRPRFPRSWQ 290
           Y+  L        + PP P     K   R+PR PR  Q
Sbjct: 235 YKGRLTDEQLKELENPPTPKPRPTKVSRRKPRPPRPTQ 272



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 592 QFPRPENSRWPSPLPTSAARR 654
           Q    EN   P P PT  +RR
Sbjct: 243 QLKELENPPTPKPRPTKVSRR 263


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 250 FSNVLRGTGGAFVLVLYDEI 191
           ++  L  TGG  V+ L DEI
Sbjct: 512 YNRFLAATGGDHVISLIDEI 531


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 212 HEGTTSTSEDVGEGSLKKAEVPSVLAMVAQ 301
           +EG+   S+      L++A V SVL+ + Q
Sbjct: 104 NEGSQKYSQVAANPGLRQAMVTSVLSFIDQ 133


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 212 HEGTTSTSEDVGEGSLKKAEVPSVLAMVAQ 301
           +EG+   S+      L++A V SVL+ + Q
Sbjct: 104 NEGSQKYSQVAANPGLRQAMVTSVLSFIDQ 133


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 11  VSSFFFFFLWNHCITLY 61
           +S+FF+FF   + I  Y
Sbjct: 243 ISTFFYFFTTGNIIATY 259


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 299 QQWMVFLYRISLLARPDCIIMRLRTVSK 382
           Q ++ F Y++ L    D I+MR + +++
Sbjct: 156 QNYIHFFYQLLLYLITDMILMRYKELNR 183


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 11  VSSFFFFFLWNHCITLY 61
           +S+FF+FF   + I  Y
Sbjct: 239 ISTFFYFFTTGNIIATY 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,270
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)