Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30060
(814 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 24 1.7
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 2.2
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.9
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.9
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.9
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 5.0
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.0
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 22 6.7
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 22 6.7
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 22 6.7
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 6.7
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 531 RPLWVTPSTLVFKDEGTIIETVPLPGSGI 445
RP W P + D ++T P PG +
Sbjct: 409 RPEWARPPSTPSADGSKPVQTTPKPGQWV 437
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 263 ATTPRSAPTEAPSGSRPDPSALSV 192
++TP S PT+ S S P S+ SV
Sbjct: 78 SSTPSSLPTQRTSTSNPTYSSRSV 101
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.0 bits (47), Expect = 2.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 600 RIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSTLVFKDEGTI 478
+IPW+ NA+A K G G W+ ++EG I
Sbjct: 330 QIPWDKNAEALAKWANGQTGFP----WIDAIMTQLREEGWI 366
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 682 NFQGPQRVSGHRRKC 638
NF GP R++ R+C
Sbjct: 601 NFHGPHRLAARSRRC 615
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 682 NFQGPQRVSGHRRKC 638
NF GP R++ R+C
Sbjct: 493 NFHGPHRLAARSRRC 507
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 13 GRWPWKSESAKECATTHLPKQPAL 84
GR WK + AT L K P+L
Sbjct: 79 GRKAWKHLDFRNSATAELLKNPSL 102
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 13 GRWPWKSESAKECATTHLPKQPAL 84
GR WK + AT L K P+L
Sbjct: 79 GRKAWKHLDFRNSATAELLKNPSL 102
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 260 TTPRSAPTEAPSGSRPDPSALSVAHVLLVTA**YQIKNLASHVPV 126
+TPRS+P E S P A + + +A + L SH P+
Sbjct: 152 STPRSSPAETASSLSPQSVASTAS-----SADHQIVDRLLSHAPI 191
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -3
Query: 695 HPSPEFSRSAESIRTPPQMRCSSRSE-----PYLPSIGFH 591
HP S+ + + PPQ+ + R E P +P + F+
Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFY 256
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 21.8 bits (44), Expect = 6.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 260 TTPRSAPTEAPSGSRPDPSALSVAHVLLVTA**YQIKNLASHVPV 126
+TPRS+P E S P A + + +A + L SH P+
Sbjct: 143 STPRSSPAETASSLSPQSVASTAS-----SADHQIVDRLLSHAPI 182
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/25 (28%), Positives = 12/25 (48%)
Frame = -3
Query: 728 YGYEPARHLHVHPSPEFSRSAESIR 654
+ Y P H +P+P + A+ R
Sbjct: 76 WNYSPDNHFEQYPNPTYYNLADPAR 100
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,069
Number of Sequences: 336
Number of extensions: 4645
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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