Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30060
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     26   1.2  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   3.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.7  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    24   4.8  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   6.4  

>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -2

Query: 552 GPLGGVFRPLWVTPSTLVFKDEGTIIETVPLPGSGIGTGFPF 427
           G   G F P +  PS   F D  T I  +P  G+G G GFPF
Sbjct: 74  GGSSGAF-PQFSIPSWTNFTDAFTSI--LPFFGNGQGGGFPF 112


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 562 NSSRTSRRRLQATL 521
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 322 LLFTRNPSPRQSSRASLEYLLLPQDLHRRRLQAAHAQTLLRS 197
           L+ + + +   SS      LLLPQD H   L+ A   +L R+
Sbjct: 218 LVLSNSAAAACSSVYPASSLLLPQDAHHPALEIALPSSLFRA 259


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 388 IIFKNNEK*RPLSERESGSYSGTRQRNRF 474
           IIF  N +   + ER  GS+S   +RN F
Sbjct: 37  IIFVRNNRALLIYERMGGSWSEVHKRNNF 65


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 317 VHAKPFSTSVLQGLAGVFATTPRSAPT 237
           +HAKP    +  G+  +  TTP SA T
Sbjct: 1   MHAKPAFVLIALGVICLLQTTPTSAST 27


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 296 TSVLQGLAGVFATTPRSAPTEAPSGSR 216
           ++V    AG  A+TP + P+ +PS +R
Sbjct: 154 SNVAAAAAGASASTPPTIPSASPSPTR 180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 905,622
Number of Sequences: 2352
Number of extensions: 20145
Number of successful extensions: 263
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)