Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30060
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ118267-1|AAZ94749.1|   79|Homo sapiens immunoglobulin heavy ch...    33   1.6  
AF180681-1|AAF36817.1| 1544|Homo sapiens guanine nucleotide exch...    33   1.6  
AB002380-1|BAA20836.2| 1443|Homo sapiens KIAA0382 protein protein.     33   1.6  
BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein LO...    31   6.5  
BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein LO...    31   6.5  
AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.              31   6.5  
AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.              31   6.5  
AF471330-1|AAQ05505.1|  127|Homo sapiens Ig heavy chain variable...    30   8.7  

>DQ118267-1|AAZ94749.1|   79|Homo sapiens immunoglobulin heavy chain
           VDJ region protein.
          Length = 79

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -2

Query: 462 LPGSGIGTGFPFAQRALFFIIFKNYKKTRHIDIRSLLELRID*LASNYCSRETLLHV 292
           + GSG  T +    +  F I   N K T H+ + SL   R++  A  YCS+++ +HV
Sbjct: 15  ISGSGDSTYYTNLAKGRFXISRDNSKNTVHLQMNSL---RVEDTAIYYCSKDSGMHV 68


>AF180681-1|AAF36817.1| 1544|Homo sapiens guanine nucleotide exchange
            factor protein.
          Length = 1544

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +2

Query: 437  PVPIPE--PGSGTVSIIVPSSLKTSVDGVTQSGLKTPPRGPG 556
            P+P+P+  PG G      PS LK    G++ +GL++P R  G
Sbjct: 1141 PIPLPQSTPGEGDNDEEDPSKLKEEQHGISVTGLQSPDRDLG 1182


>AB002380-1|BAA20836.2| 1443|Homo sapiens KIAA0382 protein protein.
          Length = 1443

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +2

Query: 437  PVPIPE--PGSGTVSIIVPSSLKTSVDGVTQSGLKTPPRGPG 556
            P+P+P+  PG G      PS LK    G++ +GL++P R  G
Sbjct: 1040 PIPLPQSTPGEGDNDEEDPSKLKEEQHGISVTGLQSPDRDLG 1081


>BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 577 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 708
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 577 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 708
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 577 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 708
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.
          Length = 423

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 577 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 708
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AF471330-1|AAQ05505.1|  127|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 127

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -2

Query: 462 LPGSGIGTGFPFAQRALFFIIFKNYKKTRHIDIRSLLELRID*LASNYCSRETLLHVSPP 283
           + GSG  T +  + +  F I   N K T ++ + SL   R +     +C++     VS P
Sbjct: 51  ISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSL---RAEDTGVYFCAKGL---VSTP 104

Query: 282 GPRWSICY 259
           GPRW   Y
Sbjct: 105 GPRWYYYY 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,414,864
Number of Sequences: 237096
Number of extensions: 3049197
Number of successful extensions: 10418
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10402
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)